Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RN7SKP226-201ENST00000364912 300 ntBASIC2.41□□□□□ -2.02
TPM4P67936 MIR128-1-201ENST00000384921 82 ntBASIC2.41□□□□□ -2.02
TPM4P67936 MIR221-201ENST00000385135 110 ntBASIC2.41□□□□□ -2.02
TPM4P67936 NPM1P10-201ENST00000398310 865 ntBASIC2.41□□□□□ -2.02
TPM4P67936 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.41□□□□□ -2.02
TPM4P67936 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.41□□□□□ -2.02
TPM4P67936 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.41□□□□□ -2.02
TPM4P67936 NUP35P1-201ENST00000422734 947 ntBASIC2.41□□□□□ -2.02
TPM4P67936 TAAR7P-201ENST00000436141 242 ntBASIC2.41□□□□□ -2.02
TPM4P67936 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.41□□□□□ -2.02
TPM4P67936 RFC5P1-201ENST00000454419 874 ntBASIC2.41□□□□□ -2.02
TPM4P67936 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.41□□□□□ -2.02
TPM4P67936 AL672167.3-201ENST00000465951 960 ntBASIC2.41□□□□□ -2.02
TPM4P67936 AC108734.3-201ENST00000481241 1165 ntBASIC2.41□□□□□ -2.02
TPM4P67936 RNA5SP364-201ENST00000516938 78 ntBASIC2.41□□□□□ -2.02
TPM4P67936 ARL2BPP5-201ENST00000523141 481 ntBASIC2.41□□□□□ -2.02
TPM4P67936 OR4K7P-201ENST00000580232 945 ntBASIC2.41□□□□□ -2.02
TPM4P67936 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.41□□□□□ -2.02
TPM4P67936 AL450472.3-201ENST00000615578 367 ntBASIC2.41□□□□□ -2.02
TPM4P67936 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.41□□□□□ -2.02
TPM4P67936 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TPM4P67936 AL163051.2-201ENST00000618976 735 ntBASIC2.41□□□□□ -2.02
TPM4P67936 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.41□□□□□ -2.02
TPM4P67936 MIR7515-201ENST00000637837 67 ntBASIC2.41□□□□□ -2.02
TPM4P67936 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.41□□□□□ -2.02
TPM4P67936 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TPM4P67936 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.4□□□□□ -2.02
TPM4P67936 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.4□□□□□ -2.02
TPM4P67936 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.4□□□□□ -2.03
TPM4P67936 RNU2-15P-201ENST00000410692 191 ntBASIC2.4□□□□□ -2.03
TPM4P67936 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.4□□□□□ -2.03
TPM4P67936 AC099548.1-201ENST00000421443 426 ntBASIC2.4□□□□□ -2.03
TPM4P67936 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.4□□□□□ -2.03
TPM4P67936 UBE2V2P3-201ENST00000433562 437 ntBASIC2.4□□□□□ -2.03
TPM4P67936 AC009237.8-201ENST00000445492 379 ntBASIC2.4□□□□□ -2.03
TPM4P67936 AC005002.1-201ENST00000447458 540 ntBASIC2.4□□□□□ -2.03
TPM4P67936 RPS3P1-201ENST00000456781 192 ntBASIC2.4□□□□□ -2.03
TPM4P67936 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.4□□□□□ -2.03
TPM4P67936 NDUFS5P6-201ENST00000529136 295 ntBASIC2.4□□□□□ -2.03
TPM4P67936 SETP7-201ENST00000552169 453 ntBASIC2.4□□□□□ -2.03
TPM4P67936 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.4□□□□□ -2.03
TPM4P67936 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.4□□□□□ -2.03
TPM4P67936 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.4□□□□□ -2.03
TPM4P67936 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.4□□□□□ -2.03
TPM4P67936 AC009314.1-201ENST00000603871 304 ntBASIC2.4□□□□□ -2.03
TPM4P67936 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.4□□□□□ -2.03
TPM4P67936 MIR92B-201ENST00000607575 96 ntBASIC2.4□□□□□ -2.03
TPM4P67936 AC092954.1-201ENST00000609121 445 ntBASIC2.4□□□□□ -2.03
TPM4P67936 AC135507.2-201ENST00000612443 309 ntBASIC2.4□□□□□ -2.03
TPM4P67936 AC090132.2-201ENST00000615881 347 ntBASIC2.4□□□□□ -2.03
TPM4P67936 AC098657.3-201ENST00000620434 263 ntBASIC2.4□□□□□ -2.03
TPM4P67936 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.4□□□□□ -2.03
TPM4P67936 CTSLP2-204ENST00000629029 392 ntBASIC2.4□□□□□ -2.03
TPM4P67936 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
TPM4P67936 RNU6-115P-201ENST00000364310 107 ntBASIC2.39□□□□□ -2.03
TPM4P67936 MIR135A2-201ENST00000384854 100 ntBASIC2.39□□□□□ -2.03
TPM4P67936 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TPM4P67936 RNA5SP338-201ENST00000410495 85 ntBASIC2.39□□□□□ -2.03
TPM4P67936 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.39□□□□□ -2.03
TPM4P67936 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TPM4P67936 AL590623.1-201ENST00000427864 105 ntBASIC2.39□□□□□ -2.03
TPM4P67936 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.39□□□□□ -2.03
TPM4P67936 AC025750.2-201ENST00000442609 450 ntBASIC2.39□□□□□ -2.03
TPM4P67936 RPL23AP7-203ENST00000449021 469 ntBASIC2.39□□□□□ -2.03
TPM4P67936 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.39□□□□□ -2.03
TPM4P67936 RPL23AP49-201ENST00000492925 468 ntBASIC2.39□□□□□ -2.03
TPM4P67936 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.39□□□□□ -2.03
TPM4P67936 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.39□□□□□ -2.03
TPM4P67936 AC008413.1-201ENST00000511864 177 ntBASIC2.39□□□□□ -2.03
TPM4P67936 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.39□□□□□ -2.03
TPM4P67936 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.39□□□□□ -2.03
TPM4P67936 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.39□□□□□ -2.03
TPM4P67936 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.39□□□□□ -2.03
TPM4P67936 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.39□□□□□ -2.03
TPM4P67936 AC233266.2-201ENST00000567067 528 ntBASIC2.39□□□□□ -2.03
TPM4P67936 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
TPM4P67936 AL355877.2-201ENST00000603670 358 ntBASIC2.39□□□□□ -2.03
TPM4P67936 AC135507.1-201ENST00000607214 561 ntBASIC2.39□□□□□ -2.03
TPM4P67936 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.39□□□□□ -2.03
TPM4P67936 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.39□□□□□ -2.03
TPM4P67936 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TPM4P67936 RNU6-619P-201ENST00000365146 108 ntBASIC2.38□□□□□ -2.03
TPM4P67936 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TPM4P67936 RNU2-40P-201ENST00000410833 196 ntBASIC2.38□□□□□ -2.03
TPM4P67936 Z85995.1-201ENST00000415547 335 ntBASIC2.38□□□□□ -2.03
TPM4P67936 MTND4LP14-201ENST00000429447 288 ntBASIC2.38□□□□□ -2.03
TPM4P67936 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.38□□□□□ -2.03
TPM4P67936 AL109933.2-201ENST00000452651 260 ntBASIC2.38□□□□□ -2.03
TPM4P67936 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.38□□□□□ -2.03
TPM4P67936 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.38□□□□□ -2.03
TPM4P67936 RNA5SP356-201ENST00000515972 94 ntBASIC2.38□□□□□ -2.03
TPM4P67936 RNU6-1282P-201ENST00000516735 96 ntBASIC2.38□□□□□ -2.03
TPM4P67936 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.38□□□□□ -2.03
TPM4P67936 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.38□□□□□ -2.03
TPM4P67936 AGGF1P5-201ENST00000567900 919 ntBASIC2.38□□□□□ -2.03
TPM4P67936 AC023824.3-201ENST00000569003 562 ntBASIC2.38□□□□□ -2.03
TPM4P67936 OR10AB1P-201ENST00000609613 938 ntBASIC2.38□□□□□ -2.03
TPM4P67936 AC093838.1-201ENST00000613014 469 ntBASIC2.38□□□□□ -2.03
TPM4P67936 AL109809.4-201ENST00000603520 2185 ntBASIC2.37□□□□□ -2.03
TPM4P67936 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms