Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PMCHL2-203ENST00000457791 237 ntBASIC0.79□□□□□ -2.28
RPL39P62891 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.79□□□□□ -2.28
RPL39P62891 AC084033.1-201ENST00000550830 633 ntBASIC0.79□□□□□ -2.28
RPL39P62891 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.79□□□□□ -2.28
RPL39P62891 NUTF2P8-201ENST00000604593 363 ntBASIC0.79□□□□□ -2.28
RPL39P62891 AC106052.1-201ENST00000608029 497 ntBASIC0.79□□□□□ -2.28
RPL39P62891 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.79□□□□□ -2.28
RPL39P62891 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.79□□□□□ -2.28
RPL39P62891 MFSD8-213ENST00000641134 1327 ntBASIC0.79□□□□□ -2.28
RPL39P62891 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.79□□□□□ -2.28
RPL39P62891 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RPL39P62891 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.78□□□□□ -2.28
RPL39P62891 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.78□□□□□ -2.28
RPL39P62891 SNORD14B-201ENST00000364533 90 ntBASIC0.78□□□□□ -2.28
RPL39P62891 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
RPL39P62891 TXNP7-201ENST00000406296 293 ntBASIC0.78□□□□□ -2.28
RPL39P62891 AL591034.1-201ENST00000407447 340 ntBASIC0.78□□□□□ -2.28
RPL39P62891 SPA17P1-201ENST00000416656 452 ntBASIC0.78□□□□□ -2.28
RPL39P62891 AL121882.1-201ENST00000422893 417 ntBASIC0.78□□□□□ -2.28
RPL39P62891 Z85994.2-201ENST00000434327 452 ntBASIC0.78□□□□□ -2.28
RPL39P62891 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC0.78□□□□□ -2.28
RPL39P62891 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.78□□□□□ -2.28
RPL39P62891 HMGB1P48-201ENST00000446155 598 ntBASIC0.78□□□□□ -2.28
RPL39P62891 RPS29P28-201ENST00000446439 141 ntBASIC0.78□□□□□ -2.28
RPL39P62891 RPL23AP23-201ENST00000452590 471 ntBASIC0.78□□□□□ -2.28
RPL39P62891 AC092902.1-201ENST00000486999 259 ntBASIC0.78□□□□□ -2.28
RPL39P62891 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.78□□□□□ -2.28
RPL39P62891 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC0.78□□□□□ -2.28
RPL39P62891 RNU6-928P-201ENST00000516876 104 ntBASIC0.78□□□□□ -2.28
RPL39P62891 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC0.78□□□□□ -2.28
RPL39P62891 AC118942.1-201ENST00000529674 1035 ntBASIC0.78□□□□□ -2.28
RPL39P62891 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC0.78□□□□□ -2.28
RPL39P62891 ARL1-211ENST00000551828 776 ntTSL 5 BASIC0.78□□□□□ -2.28
RPL39P62891 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC0.78□□□□□ -2.28
RPL39P62891 AC073413.2-201ENST00000604332 360 ntBASIC0.78□□□□□ -2.28
RPL39P62891 AL135786.2-201ENST00000608422 615 ntBASIC0.78□□□□□ -2.28
RPL39P62891 AL445493.3-201ENST00000619568 477 ntBASIC0.78□□□□□ -2.28
RPL39P62891 MKKS-204ENST00000639674 192 ntBASIC0.78□□□□□ -2.28
RPL39P62891 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
RPL39P62891 AC025263.3-201ENST00000622965 1396 ntBASIC0.78□□□□□ -2.28
RPL39P62891 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
RPL39P62891 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
RPL39P62891 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
RPL39P62891 AL021407.1-201ENST00000404531 386 ntBASIC0.77□□□□□ -2.29
RPL39P62891 MIR1289-2-201ENST00000408360 111 ntBASIC0.77□□□□□ -2.29
RPL39P62891 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC0.77□□□□□ -2.29
RPL39P62891 BX276092.3-201ENST00000424182 230 ntBASIC0.77□□□□□ -2.29
RPL39P62891 SLC44A3-AS1-205ENST00000424505 612 ntBASIC0.77□□□□□ -2.29
RPL39P62891 ARPC3P1-201ENST00000437218 533 ntBASIC0.77□□□□□ -2.29
RPL39P62891 WASF1P1-201ENST00000447560 1131 ntBASIC0.77□□□□□ -2.29
RPL39P62891 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC0.77□□□□□ -2.29
RPL39P62891 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.77□□□□□ -2.29
RPL39P62891 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.77□□□□□ -2.29
RPL39P62891 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC0.77□□□□□ -2.29
RPL39P62891 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
RPL39P62891 AC022447.3-201ENST00000506865 495 ntBASIC0.77□□□□□ -2.29
RPL39P62891 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
RPL39P62891 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC0.77□□□□□ -2.29
RPL39P62891 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.77□□□□□ -2.29
RPL39P62891 MTCYBP23-201ENST00000558717 1102 ntBASIC0.77□□□□□ -2.29
RPL39P62891 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
RPL39P62891 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.77□□□□□ -2.29
RPL39P62891 AC023043.2-201ENST00000589678 1026 ntBASIC0.77□□□□□ -2.29
RPL39P62891 AC025811.1-201ENST00000604312 472 ntBASIC0.77□□□□□ -2.29
RPL39P62891 AC105429.2-201ENST00000610567 517 ntBASIC0.77□□□□□ -2.29
RPL39P62891 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
RPL39P62891 RNF6P1-201ENST00000444889 1784 ntBASIC0.77□□□□□ -2.29
RPL39P62891 AC009812.4-201ENST00000569134 1805 ntBASIC0.77□□□□□ -2.29
RPL39P62891 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC0.77□□□□□ -2.29
RPL39P62891 SNORA62.1-201ENST00000364287 154 ntBASIC0.76□□□□□ -2.29
RPL39P62891 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
RPL39P62891 AL161449.1-201ENST00000414531 1199 ntBASIC0.76□□□□□ -2.29
RPL39P62891 AC013268.2-201ENST00000420753 337 ntBASIC0.76□□□□□ -2.29
RPL39P62891 AC093084.1-201ENST00000424233 687 ntBASIC0.76□□□□□ -2.29
RPL39P62891 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.76□□□□□ -2.29
RPL39P62891 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.76□□□□□ -2.29
RPL39P62891 SNRPEP4-201ENST00000435815 279 ntBASIC0.76□□□□□ -2.29
RPL39P62891 HSPE1P21-201ENST00000438283 308 ntBASIC0.76□□□□□ -2.29
RPL39P62891 RPL23AP76-201ENST00000441860 458 ntBASIC0.76□□□□□ -2.29
RPL39P62891 GAPDHP39-201ENST00000481866 979 ntBASIC0.76□□□□□ -2.29
RPL39P62891 RPL36AP21-201ENST00000490372 323 ntBASIC0.76□□□□□ -2.29
RPL39P62891 EIF4EP3-201ENST00000498782 656 ntBASIC0.76□□□□□ -2.29
RPL39P62891 AC093852.1-201ENST00000503587 266 ntBASIC0.76□□□□□ -2.29
RPL39P62891 AC021146.2-201ENST00000504736 556 ntBASIC0.76□□□□□ -2.29
RPL39P62891 PCNAP1-201ENST00000505363 709 ntBASIC0.76□□□□□ -2.29
RPL39P62891 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.76□□□□□ -2.29
RPL39P62891 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.76□□□□□ -2.29
RPL39P62891 MTCO2P32-201ENST00000514865 403 ntBASIC0.76□□□□□ -2.29
RPL39P62891 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC0.76□□□□□ -2.29
RPL39P62891 AC084364.2-201ENST00000546924 395 ntBASIC0.76□□□□□ -2.29
RPL39P62891 MIR4421-201ENST00000578133 69 ntBASIC0.76□□□□□ -2.29
RPL39P62891 AP001485.1-201ENST00000604799 199 ntBASIC0.76□□□□□ -2.29
RPL39P62891 AC112503.1-201ENST00000608436 391 ntBASIC0.76□□□□□ -2.29
RPL39P62891 AC109454.4-201ENST00000623411 649 ntBASIC0.76□□□□□ -2.29
RPL39P62891 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.76□□□□□ -2.29
RPL39P62891 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC0.76□□□□□ -2.29
RPL39P62891 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.76□□□□□ -2.29
RPL39P62891 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
RPL39P62891 AL161722.3-201ENST00000605789 2983 ntBASIC0.75□□□□□ -2.29
RPL39P62891 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms