Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.94□□□□□ -1.62
RTP1P59025 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.94□□□□□ -1.62
RTP1P59025 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RTP1P59025 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
RTP1P59025 MTND5P28-201ENST00000438005 1594 ntBASIC4.94□□□□□ -1.62
RTP1P59025 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RTP1P59025 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
RTP1P59025 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.94□□□□□ -1.62
RTP1P59025 MAPK10-320ENST00000641462 6696 ntBASIC4.94□□□□□ -1.62
RTP1P59025 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RTP1P59025 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.93□□□□□ -1.62
RTP1P59025 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RTP1P59025 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.93□□□□□ -1.62
RTP1P59025 AP001350.1-201ENST00000601906 1524 ntBASIC4.93□□□□□ -1.62
RTP1P59025 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.93□□□□□ -1.62
RTP1P59025 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTP1P59025 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RTP1P59025 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.93□□□□□ -1.62
RTP1P59025 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTP1P59025 AP000542.2-201ENST00000623199 6179 ntBASIC4.93□□□□□ -1.62
RTP1P59025 AC011155.1-201ENST00000316512 456 ntBASIC4.93□□□□□ -1.62
RTP1P59025 RNA5SP391-201ENST00000363456 119 ntBASIC4.93□□□□□ -1.62
RTP1P59025 U3.11-201ENST00000364476 212 ntBASIC4.93□□□□□ -1.62
RTP1P59025 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.93□□□□□ -1.62
RTP1P59025 MIR3065-201ENST00000390137 79 ntBASIC4.93□□□□□ -1.62
RTP1P59025 RNU6-308P-201ENST00000390957 107 ntBASIC4.93□□□□□ -1.62
RTP1P59025 MTCYBP4-201ENST00000401524 249 ntBASIC4.93□□□□□ -1.62
RTP1P59025 AL592114.1-201ENST00000403842 483 ntBASIC4.93□□□□□ -1.62
RTP1P59025 MIR548K-201ENST00000408406 116 ntBASIC4.93□□□□□ -1.62
RTP1P59025 MIR548F5-201ENST00000408421 86 ntBASIC4.93□□□□□ -1.62
RTP1P59025 SNORA74C-2-201ENST00000411179 201 ntBASIC4.93□□□□□ -1.62
RTP1P59025 AC009302.1-201ENST00000417147 390 ntBASIC4.93□□□□□ -1.62
RTP1P59025 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.93□□□□□ -1.62
RTP1P59025 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.93□□□□□ -1.62
RTP1P59025 RPL23AP52-201ENST00000439311 478 ntBASIC4.93□□□□□ -1.62
RTP1P59025 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.93□□□□□ -1.62
RTP1P59025 RPL32P28-201ENST00000443577 397 ntBASIC4.93□□□□□ -1.62
RTP1P59025 AL118520.1-201ENST00000450770 291 ntBASIC4.93□□□□□ -1.62
RTP1P59025 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.93□□□□□ -1.62
RTP1P59025 RNU7-180P-201ENST00000459240 63 ntBASIC4.93□□□□□ -1.62
RTP1P59025 VN1R105P-201ENST00000486595 910 ntBASIC4.93□□□□□ -1.62
RTP1P59025 AC083904.1-201ENST00000487828 231 ntBASIC4.93□□□□□ -1.62
RTP1P59025 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.93□□□□□ -1.62
RTP1P59025 RPS27AP13-201ENST00000498403 237 ntBASIC4.93□□□□□ -1.62
RTP1P59025 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.93□□□□□ -1.62
RTP1P59025 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.93□□□□□ -1.62
RTP1P59025 AC116562.3-201ENST00000506136 177 ntBASIC4.93□□□□□ -1.62
RTP1P59025 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.93□□□□□ -1.62
RTP1P59025 RNA5SP497-201ENST00000516081 97 ntBASIC4.93□□□□□ -1.62
RTP1P59025 RNU6-1088P-201ENST00000516850 104 ntBASIC4.93□□□□□ -1.62
RTP1P59025 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.93□□□□□ -1.62
RTP1P59025 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.93□□□□□ -1.62
RTP1P59025 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.93□□□□□ -1.62
RTP1P59025 AC068587.5-201ENST00000528506 175 ntBASIC4.93□□□□□ -1.62
RTP1P59025 AC018630.1-201ENST00000541376 925 ntBASIC4.93□□□□□ -1.62
RTP1P59025 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.93□□□□□ -1.62
RTP1P59025 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.93□□□□□ -1.62
RTP1P59025 AL031666.3-201ENST00000609320 1006 ntBASIC4.93□□□□□ -1.62
RTP1P59025 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.93□□□□□ -1.62
RTP1P59025 uc_338.22-201ENST00000622722 187 ntBASIC4.93□□□□□ -1.62
RTP1P59025 AC244517.12-201ENST00000623581 663 ntBASIC4.93□□□□□ -1.62
RTP1P59025 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RTP1P59025 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RTP1P59025 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RTP1P59025 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.93□□□□□ -1.62
RTP1P59025 AL138713.1-201ENST00000624026 2130 ntBASIC4.93□□□□□ -1.62
RTP1P59025 NXPH1-205ENST00000602349 1953 ntBASIC4.93□□□□□ -1.62
RTP1P59025 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RTP1P59025 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RTP1P59025 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.92□□□□□ -1.62
RTP1P59025 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.92□□□□□ -1.62
RTP1P59025 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RTP1P59025 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.92□□□□□ -1.62
RTP1P59025 NOL8P1-201ENST00000508336 3529 ntBASIC4.92□□□□□ -1.62
RTP1P59025 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RTP1P59025 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RTP1P59025 EOGT-210ENST00000615922 1931 ntBASIC4.92□□□□□ -1.62
RTP1P59025 Y_RNA.187-201ENST00000363918 113 ntBASIC4.92□□□□□ -1.62
RTP1P59025 RNU6-1029P-201ENST00000384109 107 ntBASIC4.92□□□□□ -1.62
RTP1P59025 RNU6-1013P-201ENST00000384180 107 ntBASIC4.92□□□□□ -1.62
RTP1P59025 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RTP1P59025 RNU2-29P-201ENST00000410423 189 ntBASIC4.92□□□□□ -1.62
RTP1P59025 Y_RNA.605-201ENST00000410577 105 ntBASIC4.92□□□□□ -1.62
RTP1P59025 RN7SKP247-201ENST00000411094 308 ntBASIC4.92□□□□□ -1.62
RTP1P59025 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.92□□□□□ -1.62
RTP1P59025 AL139095.3-201ENST00000419672 1203 ntBASIC4.92□□□□□ -1.62
RTP1P59025 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RTP1P59025 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.92□□□□□ -1.62
RTP1P59025 RPL23AP25-201ENST00000430973 463 ntBASIC4.92□□□□□ -1.62
RTP1P59025 AC108059.2-201ENST00000434626 151 ntBASIC4.92□□□□□ -1.62
RTP1P59025 AC007389.2-201ENST00000434630 306 ntBASIC4.92□□□□□ -1.62
RTP1P59025 RPL23AP83-201ENST00000434984 473 ntBASIC4.92□□□□□ -1.62
RTP1P59025 RPS29P7-201ENST00000439662 171 ntBASIC4.92□□□□□ -1.62
RTP1P59025 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RTP1P59025 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RTP1P59025 MTND1P9-201ENST00000453775 944 ntBASIC4.92□□□□□ -1.62
RTP1P59025 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.92□□□□□ -1.62
RTP1P59025 AC093303.1-201ENST00000514549 295 ntBASIC4.92□□□□□ -1.62
RTP1P59025 RNU6-1038P-201ENST00000516516 104 ntBASIC4.92□□□□□ -1.62
RTP1P59025 AC022634.1-201ENST00000520765 532 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms