Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.19□□□□□ -1.74
PER3P56645 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PER3P56645 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PER3P56645 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.19□□□□□ -1.74
PER3P56645 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.19□□□□□ -1.74
PER3P56645 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
PER3P56645 RAD17P1-201ENST00000418130 2042 ntBASIC4.19□□□□□ -1.74
PER3P56645 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.19□□□□□ -1.74
PER3P56645 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
PER3P56645 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PER3P56645 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PER3P56645 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PER3P56645 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PER3P56645 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PER3P56645 AC125257.1-201ENST00000560400 2930 ntBASIC4.18□□□□□ -1.74
PER3P56645 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PER3P56645 RNU6-179P-201ENST00000363350 107 ntBASIC4.18□□□□□ -1.74
PER3P56645 Y_RNA.166-201ENST00000363730 102 ntBASIC4.18□□□□□ -1.74
PER3P56645 Y_RNA.231-201ENST00000364358 102 ntBASIC4.18□□□□□ -1.74
PER3P56645 RNA5SP513-201ENST00000364648 118 ntBASIC4.18□□□□□ -1.74
PER3P56645 SNORA23-201ENST00000365128 182 ntBASIC4.18□□□□□ -1.74
PER3P56645 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.18□□□□□ -1.74
PER3P56645 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.18□□□□□ -1.74
PER3P56645 MTCO3P46-201ENST00000425787 232 ntBASIC4.18□□□□□ -1.74
PER3P56645 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.18□□□□□ -1.74
PER3P56645 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.18□□□□□ -1.74
PER3P56645 AL353748.1-201ENST00000440753 474 ntBASIC4.18□□□□□ -1.74
PER3P56645 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.18□□□□□ -1.74
PER3P56645 MTND1P18-201ENST00000448191 573 ntBASIC4.18□□□□□ -1.74
PER3P56645 NUTF2P3-201ENST00000448540 384 ntBASIC4.18□□□□□ -1.74
PER3P56645 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.18□□□□□ -1.74
PER3P56645 RNU7-180P-201ENST00000459240 63 ntBASIC4.18□□□□□ -1.74
PER3P56645 AC025445.1-201ENST00000502728 300 ntBASIC4.18□□□□□ -1.74
PER3P56645 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PER3P56645 RNA5SP503-201ENST00000517047 117 ntBASIC4.18□□□□□ -1.74
PER3P56645 SNORA31.22-201ENST00000517204 135 ntBASIC4.18□□□□□ -1.74
PER3P56645 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.18□□□□□ -1.74
PER3P56645 AC008489.1-201ENST00000524271 483 ntBASIC4.18□□□□□ -1.74
PER3P56645 AC078814.3-201ENST00000553036 491 ntBASIC4.18□□□□□ -1.74
PER3P56645 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.18□□□□□ -1.74
PER3P56645 AC106785.1-201ENST00000565935 262 ntBASIC4.18□□□□□ -1.74
PER3P56645 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.18□□□□□ -1.74
PER3P56645 AC130324.3-201ENST00000614165 542 ntBASIC4.18□□□□□ -1.74
PER3P56645 AC009248.2-201ENST00000619826 254 ntBASIC4.18□□□□□ -1.74
PER3P56645 AC025034.2-201ENST00000623264 286 ntBASIC4.18□□□□□ -1.74
PER3P56645 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
PER3P56645 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.18□□□□□ -1.74
PER3P56645 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PER3P56645 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PER3P56645 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.18□□□□□ -1.74
PER3P56645 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PER3P56645 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.18□□□□□ -1.74
PER3P56645 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PER3P56645 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.17□□□□□ -1.74
PER3P56645 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.17□□□□□ -1.74
PER3P56645 RNU4-73P-201ENST00000363164 141 ntBASIC4.17□□□□□ -1.74
PER3P56645 Y_RNA.356-201ENST00000365475 113 ntBASIC4.17□□□□□ -1.74
PER3P56645 RHOT1P2-201ENST00000366423 333 ntBASIC4.17□□□□□ -1.74
PER3P56645 Y_RNA.576-201ENST00000384781 102 ntBASIC4.17□□□□□ -1.74
PER3P56645 RNU6-882P-201ENST00000391025 103 ntBASIC4.17□□□□□ -1.74
PER3P56645 SDHCP2-201ENST00000398565 501 ntBASIC4.17□□□□□ -1.74
PER3P56645 AC110754.1-201ENST00000399740 601 ntBASIC4.17□□□□□ -1.74
PER3P56645 AL356432.1-201ENST00000405809 419 ntBASIC4.17□□□□□ -1.74
PER3P56645 RNU2-29P-201ENST00000410423 189 ntBASIC4.17□□□□□ -1.74
PER3P56645 RNU6-628P-201ENST00000410675 107 ntBASIC4.17□□□□□ -1.74
PER3P56645 RPS23P10-201ENST00000416185 486 ntBASIC4.17□□□□□ -1.74
PER3P56645 AL645937.1-202ENST00000421799 937 ntBASIC4.17□□□□□ -1.74
PER3P56645 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.17□□□□□ -1.74
PER3P56645 AL353678.1-201ENST00000422735 741 ntBASIC4.17□□□□□ -1.74
PER3P56645 RAC1P6-201ENST00000423911 575 ntBASIC4.17□□□□□ -1.74
PER3P56645 RPL7L1P10-201ENST00000427790 463 ntBASIC4.17□□□□□ -1.74
PER3P56645 CYCSP43-201ENST00000438233 310 ntBASIC4.17□□□□□ -1.74
PER3P56645 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.17□□□□□ -1.74
PER3P56645 AC133473.1-201ENST00000455173 299 ntBASIC4.17□□□□□ -1.74
PER3P56645 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.17□□□□□ -1.74
PER3P56645 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.17□□□□□ -1.74
PER3P56645 AC025164.1-201ENST00000496249 478 ntBASIC4.17□□□□□ -1.74
PER3P56645 FGF7P4-201ENST00000509595 295 ntBASIC4.17□□□□□ -1.74
PER3P56645 IGLVIV-65-201ENST00000517313 360 ntBASIC4.17□□□□□ -1.74
PER3P56645 AC243972.3-201ENST00000539655 198 ntBASIC4.17□□□□□ -1.74
PER3P56645 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.17□□□□□ -1.74
PER3P56645 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.17□□□□□ -1.74
PER3P56645 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.17□□□□□ -1.74
PER3P56645 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.17□□□□□ -1.74
PER3P56645 AF038458.1-201ENST00000588406 262 ntBASIC4.17□□□□□ -1.74
PER3P56645 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.17□□□□□ -1.74
PER3P56645 AC110801.1-201ENST00000623590 212 ntBASIC4.17□□□□□ -1.74
PER3P56645 FRG1KP-201ENST00000623592 341 ntBASIC4.17□□□□□ -1.74
PER3P56645 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.17□□□□□ -1.74
PER3P56645 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PER3P56645 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PER3P56645 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.17□□□□□ -1.74
PER3P56645 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
PER3P56645 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PER3P56645 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PER3P56645 AL133412.1-201ENST00000380194 2992 ntBASIC4.17□□□□□ -1.74
PER3P56645 GABPAP-201ENST00000419271 1356 ntBASIC4.16□□□□□ -1.74
PER3P56645 MTND4P35-201ENST00000604257 1375 ntBASIC4.16□□□□□ -1.74
PER3P56645 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PER3P56645 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms