Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC073073.1-201ENST00000493920 463 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 RNU6-143P-201ENST00000516942 93 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 AC069113.1-201ENST00000517763 267 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.41□□□□□ -1.7
GFRA1P56159 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.41□□□□□ -1.7
GFRA1P56159 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.41□□□□□ -1.7
GFRA1P56159 AC026371.1-201ENST00000551867 419 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 MIR548AC-201ENST00000585049 88 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA1P56159 AL391358.1-201ENST00000605342 190 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 PISRT1.1-201ENST00000616930 107 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 BX005214.3-202ENST00000619809 325 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.41□□□□□ -1.7
GFRA1P56159 AL669831.3-213ENST00000636676 183 ntBASIC4.41□□□□□ -1.7
GFRA1P56159 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.41□□□□□ -1.7
GFRA1P56159 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
GFRA1P56159 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
GFRA1P56159 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA1P56159 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA1P56159 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
GFRA1P56159 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
GFRA1P56159 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GFRA1P56159 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.41□□□□□ -1.7
GFRA1P56159 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
GFRA1P56159 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
GFRA1P56159 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GFRA1P56159 OR4G2P-202ENST00000641004 1759 ntBASIC4.4□□□□□ -1.7
GFRA1P56159 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.4□□□□□ -1.7
GFRA1P56159 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.4□□□□□ -1.7
GFRA1P56159 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.4□□□□□ -1.7
GFRA1P56159 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
GFRA1P56159 UBE2L2-201ENST00000254302 429 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 RNU6-266P-201ENST00000364225 107 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 RNU6-371P-201ENST00000364283 108 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 SNORA63C-201ENST00000364578 129 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 Y_RNA.534-201ENST00000384599 112 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 RNU4-25P-201ENST00000410569 230 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 RN7SKP100-201ENST00000411258 284 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.4□□□□□ -1.71
GFRA1P56159 AL451062.2-201ENST00000427515 271 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 Z80107.2-201ENST00000445127 392 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 HSFY6P-201ENST00000445573 403 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.4□□□□□ -1.71
GFRA1P56159 MTCO3P10-201ENST00000455912 772 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.4□□□□□ -1.71
GFRA1P56159 AP000926.1-201ENST00000479573 241 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 COX6B1P2-201ENST00000489624 230 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 AC026979.1-201ENST00000492525 396 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.4□□□□□ -1.71
GFRA1P56159 RN7SKP276-201ENST00000516242 268 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 Y_RNA.719-201ENST00000517156 106 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.4□□□□□ -1.71
GFRA1P56159 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.4□□□□□ -1.71
GFRA1P56159 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.4□□□□□ -1.71
GFRA1P56159 AC025423.5-201ENST00000550230 219 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 MIR4700-201ENST00000578311 74 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.4□□□□□ -1.71
GFRA1P56159 AP001836.1-201ENST00000604675 523 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 AP000942.4-201ENST00000604811 241 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 AC116312.1-201ENST00000606841 314 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 AL512643.1-201ENST00000635735 524 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.4□□□□□ -1.71
GFRA1P56159 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
GFRA1P56159 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
GFRA1P56159 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.4□□□□□ -1.71
GFRA1P56159 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GFRA1P56159 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.4□□□□□ -1.71
GFRA1P56159 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
GFRA1P56159 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GFRA1P56159 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
GFRA1P56159 ZNF285B-201ENST00000561698 1767 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 KPNA2P1-201ENST00000458289 1591 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 AC007823.1-201ENST00000569932 1566 ntBASIC4.4□□□□□ -1.71
GFRA1P56159 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GFRA1P56159 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
GFRA1P56159 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA1P56159 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA1P56159 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA1P56159 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
GFRA1P56159 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA1P56159 AL022322.2-201ENST00000624072 20397 ntBASIC4.39□□□□□ -1.71
GFRA1P56159 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA1P56159 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
GFRA1P56159 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA1P56159 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.39□□□□□ -1.71
GFRA1P56159 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA1P56159 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
GFRA1P56159 RNA5SP191-201ENST00000362585 102 ntBASIC4.39□□□□□ -1.71
GFRA1P56159 SNORD3E-201ENST00000362899 217 ntBASIC4.39□□□□□ -1.71
GFRA1P56159 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA1P56159 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
GFRA1P56159 RNU6-639P-201ENST00000384074 107 ntBASIC4.39□□□□□ -1.71
GFRA1P56159 RNU6-310P-201ENST00000384655 107 ntBASIC4.39□□□□□ -1.71
GFRA1P56159 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
GFRA1P56159 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.39□□□□□ -1.71
GFRA1P56159 AC114755.2-201ENST00000413520 361 ntBASIC4.39□□□□□ -1.71
GFRA1P56159 AC007738.1-201ENST00000413892 348 ntBASIC4.39□□□□□ -1.71
GFRA1P56159 AC063979.1-201ENST00000415539 377 ntBASIC4.39□□□□□ -1.71
GFRA1P56159 EI24P1-201ENST00000416584 867 ntBASIC4.39□□□□□ -1.71
GFRA1P56159 RPL31P12-201ENST00000422587 358 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms