Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH11P55287 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH11P55287 snoU13.24-201ENST00000458998 104 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AP002884.2-201ENST00000471647 395 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AC084357.1-201ENST00000473404 255 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AC020893.1-201ENST00000502452 580 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.25□□□□□ -1.89
CDH11P55287 AC104619.4-201ENST00000510773 249 ntBASIC3.25□□□□□ -1.89
CDH11P55287 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH11P55287 RN7SKP18-201ENST00000516005 275 ntBASIC3.25□□□□□ -1.89
CDH11P55287 RNU2-46P-201ENST00000517038 113 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AP006245.1-201ENST00000522549 120 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AC007991.1-201ENST00000522680 631 ntBASIC3.25□□□□□ -1.89
CDH11P55287 OR5D17P-201ENST00000531492 978 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.25□□□□□ -1.89
CDH11P55287 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH11P55287 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH11P55287 AC011602.1-201ENST00000546484 331 ntBASIC3.25□□□□□ -1.89
CDH11P55287 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH11P55287 OR4T1P-201ENST00000554933 911 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH11P55287 AL356432.3-201ENST00000568952 465 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH11P55287 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH11P55287 AC078795.2-201ENST00000602835 1252 ntBASIC3.25□□□□□ -1.89
CDH11P55287 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AL136363.2-201ENST00000604173 851 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AC104073.3-201ENST00000610942 955 ntBASIC3.25□□□□□ -1.89
CDH11P55287 Z99129.1-201ENST00000612510 255 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AP001506.1-201ENST00000615444 211 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AC084757.4-201ENST00000616350 526 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AC108479.2-201ENST00000617314 601 ntBASIC3.25□□□□□ -1.89
CDH11P55287 AC022149.2-201ENST00000621061 203 ntBASIC3.25□□□□□ -1.89
CDH11P55287 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH11P55287 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH11P55287 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH11P55287 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDH11P55287 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDH11P55287 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH11P55287 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH11P55287 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CDH11P55287 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CDH11P55287 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH11P55287 SNORD46.1-201ENST00000364139 104 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AP002088.1-201ENST00000382740 395 ntBASIC3.24□□□□□ -1.89
CDH11P55287 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH11P55287 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH11P55287 U3.39-201ENST00000408569 239 ntBASIC3.24□□□□□ -1.89
CDH11P55287 MTND1P21-201ENST00000412991 285 ntBASIC3.24□□□□□ -1.89
CDH11P55287 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH11P55287 SSXP9-201ENST00000417503 292 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH11P55287 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH11P55287 AL589872.1-201ENST00000426602 288 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH11P55287 OR4K11P-201ENST00000431829 904 ntBASIC3.24□□□□□ -1.89
CDH11P55287 HMGN2P31-201ENST00000432430 273 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AC244505.5-201ENST00000443639 207 ntBASIC3.24□□□□□ -1.89
CDH11P55287 RAC1P7-201ENST00000445367 377 ntBASIC3.24□□□□□ -1.89
CDH11P55287 TPT1P14-201ENST00000448018 505 ntBASIC3.24□□□□□ -1.89
CDH11P55287 RPS3AP46-201ENST00000448352 682 ntBASIC3.24□□□□□ -1.89
CDH11P55287 PDSS1P2-201ENST00000449397 678 ntBASIC3.24□□□□□ -1.89
CDH11P55287 GAPDHP17-201ENST00000449858 1001 ntBASIC3.24□□□□□ -1.89
CDH11P55287 TMED11P-201ENST00000479478 690 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AC092451.1-201ENST00000480211 153 ntBASIC3.24□□□□□ -1.89
CDH11P55287 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH11P55287 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH11P55287 MTND2P33-201ENST00000506452 1031 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH11P55287 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH11P55287 RNU6-405P-201ENST00000516637 110 ntBASIC3.24□□□□□ -1.89
CDH11P55287 RNU6-579P-201ENST00000516879 102 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH11P55287 AC107934.1-201ENST00000522215 217 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH11P55287 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.24□□□□□ -1.89
CDH11P55287 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH11P55287 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH11P55287 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH11P55287 AC079089.3-201ENST00000603094 673 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AL359999.1-201ENST00000604513 294 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AC006077.1-201ENST00000604746 343 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AC090578.1-201ENST00000604955 591 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AL158211.4-201ENST00000606988 584 ntBASIC3.24□□□□□ -1.89
CDH11P55287 U3.45-201ENST00000607547 219 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AL451064.1-201ENST00000607718 471 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AC090425.2-201ENST00000608818 501 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AC099778.2-201ENST00000610904 211 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AC122108.2-201ENST00000611946 526 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AC138932.5-201ENST00000617759 563 ntBASIC3.24□□□□□ -1.89
CDH11P55287 MIR6130-201ENST00000619419 109 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AC015967.1-201ENST00000619893 476 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AC098679.4-201ENST00000624241 654 ntBASIC3.24□□□□□ -1.89
CDH11P55287 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH11P55287 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH11P55287 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH11P55287 AC138915.3-201ENST00000562908 1389 ntBASIC3.24□□□□□ -1.89
CDH11P55287 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH11P55287 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH11P55287 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms