Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDH4P55283 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CDH4P55283 AC062016.1-201ENST00000355719 319 ntBASIC2.76□□□□□ -1.97
CDH4P55283 RNU6-859P-201ENST00000362728 107 ntBASIC2.76□□□□□ -1.97
CDH4P55283 SNORD21-201ENST00000383953 95 ntBASIC2.76□□□□□ -1.97
CDH4P55283 RNU6-76P-201ENST00000384060 104 ntBASIC2.76□□□□□ -1.97
CDH4P55283 RNU6-198P-201ENST00000384258 104 ntBASIC2.76□□□□□ -1.97
CDH4P55283 Y_RNA.510-201ENST00000384511 114 ntBASIC2.76□□□□□ -1.97
CDH4P55283 MTND4P13-201ENST00000402078 1023 ntBASIC2.76□□□□□ -1.97
CDH4P55283 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDH4P55283 AL592310.1-201ENST00000414330 671 ntBASIC2.76□□□□□ -1.97
CDH4P55283 MTCO2P5-201ENST00000422621 426 ntBASIC2.76□□□□□ -1.97
CDH4P55283 HMGN2P30-201ENST00000423237 256 ntBASIC2.76□□□□□ -1.97
CDH4P55283 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.76□□□□□ -1.97
CDH4P55283 MTND2P20-201ENST00000440805 661 ntBASIC2.76□□□□□ -1.97
CDH4P55283 UBBP3-201ENST00000445497 241 ntBASIC2.76□□□□□ -1.97
CDH4P55283 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH4P55283 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH4P55283 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.76□□□□□ -1.97
CDH4P55283 AC079203.1-201ENST00000487972 404 ntBASIC2.76□□□□□ -1.97
CDH4P55283 AC104629.1-201ENST00000494226 508 ntBASIC2.76□□□□□ -1.97
CDH4P55283 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH4P55283 RNU6-928P-201ENST00000516876 104 ntBASIC2.76□□□□□ -1.97
CDH4P55283 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH4P55283 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH4P55283 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH4P55283 NBEAP1-201ENST00000554452 979 ntBASIC2.76□□□□□ -1.97
CDH4P55283 ACTR3BP3-201ENST00000565577 979 ntBASIC2.76□□□□□ -1.97
CDH4P55283 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.76□□□□□ -1.97
CDH4P55283 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CDH4P55283 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH4P55283 AP001429.1-201ENST00000602568 530 ntBASIC2.76□□□□□ -1.97
CDH4P55283 AL035413.2-201ENST00000604801 525 ntBASIC2.76□□□□□ -1.97
CDH4P55283 AC112220.2-201ENST00000605513 533 ntBASIC2.76□□□□□ -1.97
CDH4P55283 AC079597.1-201ENST00000624306 508 ntBASIC2.76□□□□□ -1.97
CDH4P55283 AP000720.1-201ENST00000625091 483 ntBASIC2.76□□□□□ -1.97
CDH4P55283 AC110079.1-202ENST00000635213 138 ntBASIC2.76□□□□□ -1.97
CDH4P55283 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH4P55283 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CDH4P55283 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH4P55283 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDH4P55283 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDH4P55283 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH4P55283 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDH4P55283 Y_RNA.111-201ENST00000363248 100 ntBASIC2.75□□□□□ -1.97
CDH4P55283 RNU1-109P-201ENST00000383960 147 ntBASIC2.75□□□□□ -1.97
CDH4P55283 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.75□□□□□ -1.97
CDH4P55283 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH4P55283 NUP35P1-201ENST00000422734 947 ntBASIC2.75□□□□□ -1.97
CDH4P55283 AL390023.1-201ENST00000428836 262 ntBASIC2.75□□□□□ -1.97
CDH4P55283 AL356867.1-201ENST00000429623 299 ntBASIC2.75□□□□□ -1.97
CDH4P55283 AC090774.1-201ENST00000435925 246 ntBASIC2.75□□□□□ -1.97
CDH4P55283 AC009237.8-201ENST00000445492 379 ntBASIC2.75□□□□□ -1.97
CDH4P55283 HSPE1P6-201ENST00000479457 291 ntBASIC2.75□□□□□ -1.97
CDH4P55283 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH4P55283 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.75□□□□□ -1.97
CDH4P55283 RNU6-583P-201ENST00000516012 92 ntBASIC2.75□□□□□ -1.97
CDH4P55283 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH4P55283 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.75□□□□□ -1.97
CDH4P55283 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH4P55283 HMGB1P6-201ENST00000569046 646 ntBASIC2.75□□□□□ -1.97
CDH4P55283 AC090079.2-201ENST00000575289 768 ntBASIC2.75□□□□□ -1.97
CDH4P55283 MTCO3P13-201ENST00000577757 781 ntBASIC2.75□□□□□ -1.97
CDH4P55283 VN1R78P-201ENST00000597393 564 ntBASIC2.75□□□□□ -1.97
CDH4P55283 AC012119.1-201ENST00000603184 222 ntBASIC2.75□□□□□ -1.97
CDH4P55283 AC069304.2-201ENST00000605154 435 ntBASIC2.75□□□□□ -1.97
CDH4P55283 AC004067.1-201ENST00000608733 700 ntBASIC2.75□□□□□ -1.97
CDH4P55283 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.75□□□□□ -1.97
CDH4P55283 AL359198.2-201ENST00000611836 194 ntBASIC2.75□□□□□ -1.97
CDH4P55283 AC024257.5-201ENST00000612739 531 ntBASIC2.75□□□□□ -1.97
CDH4P55283 AP003485.2-201ENST00000623636 610 ntBASIC2.75□□□□□ -1.97
CDH4P55283 OR5H6-203ENST00000642105 978 ntBASIC2.75□□□□□ -1.97
CDH4P55283 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDH4P55283 AC005539.1-201ENST00000443768 1479 ntBASIC2.75□□□□□ -1.97
CDH4P55283 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH4P55283 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDH4P55283 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH4P55283 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.74□□□□□ -1.97
CDH4P55283 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH4P55283 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH4P55283 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH4P55283 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH4P55283 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH4P55283 MIR181B1-201ENST00000385240 110 ntBASIC2.74□□□□□ -1.97
CDH4P55283 MIR325-201ENST00000385260 98 ntBASIC2.74□□□□□ -1.97
CDH4P55283 RNU6-298P-201ENST00000390888 96 ntBASIC2.74□□□□□ -1.97
CDH4P55283 RNU2-52P-201ENST00000410680 190 ntBASIC2.74□□□□□ -1.97
CDH4P55283 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH4P55283 RPL7L1P10-201ENST00000427790 463 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AL590383.1-201ENST00000428602 75 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.74□□□□□ -1.97
CDH4P55283 ARPC3P1-201ENST00000437218 533 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AP000936.2-201ENST00000447151 681 ntBASIC2.74□□□□□ -1.97
CDH4P55283 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH4P55283 AL049829.1-201ENST00000465411 156 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AIG1P1-201ENST00000503376 148 ntBASIC2.74□□□□□ -1.97
CDH4P55283 AC009901.1-201ENST00000506703 541 ntBASIC2.74□□□□□ -1.97
CDH4P55283 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH4P55283 AC093752.1-206ENST00000511823 336 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms