Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.03□□□□□ -1.76
COPB1P53618 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
COPB1P53618 AC138915.3-201ENST00000562908 1389 ntBASIC4.02□□□□□ -1.77
COPB1P53618 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COPB1P53618 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COPB1P53618 ZNF734P-201ENST00000419494 1534 ntBASIC4.02□□□□□ -1.77
COPB1P53618 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COPB1P53618 RNU6-339P-201ENST00000384310 107 ntBASIC4.02□□□□□ -1.77
COPB1P53618 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
COPB1P53618 U3.20-201ENST00000390909 217 ntBASIC4.02□□□□□ -1.77
COPB1P53618 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COPB1P53618 MTHFD2P2-201ENST00000407725 247 ntBASIC4.02□□□□□ -1.77
COPB1P53618 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COPB1P53618 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.02□□□□□ -1.77
COPB1P53618 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.02□□□□□ -1.77
COPB1P53618 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
COPB1P53618 AC019097.1-201ENST00000424783 735 ntBASIC4.02□□□□□ -1.77
COPB1P53618 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.02□□□□□ -1.77
COPB1P53618 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.02□□□□□ -1.77
COPB1P53618 AC006989.1-201ENST00000427212 131 ntBASIC4.02□□□□□ -1.77
COPB1P53618 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.02□□□□□ -1.77
COPB1P53618 RPL21P89-201ENST00000444021 467 ntBASIC4.02□□□□□ -1.77
COPB1P53618 AL671855.1-201ENST00000446875 1203 ntBASIC4.02□□□□□ -1.77
COPB1P53618 AL136380.1-201ENST00000447970 162 ntBASIC4.02□□□□□ -1.77
COPB1P53618 SNORD121B-201ENST00000458838 81 ntBASIC4.02□□□□□ -1.77
COPB1P53618 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.02□□□□□ -1.77
COPB1P53618 COX7A2P2-201ENST00000505291 250 ntBASIC4.02□□□□□ -1.77
COPB1P53618 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.02□□□□□ -1.77
COPB1P53618 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.02□□□□□ -1.77
COPB1P53618 HIGD1AP3-201ENST00000515857 278 ntBASIC4.02□□□□□ -1.77
COPB1P53618 Y_RNA.693-201ENST00000516641 110 ntBASIC4.02□□□□□ -1.77
COPB1P53618 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.02□□□□□ -1.77
COPB1P53618 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.02□□□□□ -1.77
COPB1P53618 AP003034.1-201ENST00000534621 422 ntBASIC4.02□□□□□ -1.77
COPB1P53618 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COPB1P53618 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.02□□□□□ -1.77
COPB1P53618 SETP2-201ENST00000553886 926 ntBASIC4.02□□□□□ -1.77
COPB1P53618 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.02□□□□□ -1.77
COPB1P53618 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.02□□□□□ -1.77
COPB1P53618 AC053481.4-201ENST00000583164 216 ntBASIC4.02□□□□□ -1.77
COPB1P53618 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.02□□□□□ -1.77
COPB1P53618 AL606490.9-201ENST00000603331 271 ntBASIC4.02□□□□□ -1.77
COPB1P53618 AC115621.1-201ENST00000604653 858 ntBASIC4.02□□□□□ -1.77
COPB1P53618 AC007363.1-201ENST00000604736 620 ntBASIC4.02□□□□□ -1.77
COPB1P53618 AC110741.2-201ENST00000605278 268 ntBASIC4.02□□□□□ -1.77
COPB1P53618 MIR98-201ENST00000606724 119 ntBASIC4.02□□□□□ -1.77
COPB1P53618 AL357078.3-201ENST00000607528 618 ntBASIC4.02□□□□□ -1.77
COPB1P53618 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.02□□□□□ -1.77
COPB1P53618 AC006338.1-201ENST00000618453 749 ntBASIC4.02□□□□□ -1.77
COPB1P53618 AC091925.2-201ENST00000625059 256 ntBASIC4.02□□□□□ -1.77
COPB1P53618 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COPB1P53618 MIR1321-201ENST00000637766 79 ntBASIC4.02□□□□□ -1.77
COPB1P53618 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.02□□□□□ -1.77
COPB1P53618 AP001486.2-201ENST00000561652 5113 ntBASIC4.02□□□□□ -1.77
COPB1P53618 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
COPB1P53618 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COPB1P53618 AC011460.1-201ENST00000636268 1834 ntBASIC4.02□□□□□ -1.77
COPB1P53618 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COPB1P53618 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
COPB1P53618 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
COPB1P53618 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COPB1P53618 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
COPB1P53618 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
COPB1P53618 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
COPB1P53618 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.01□□□□□ -1.77
COPB1P53618 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
COPB1P53618 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
COPB1P53618 MIR200C-201ENST00000384980 68 ntBASIC4.01□□□□□ -1.77
COPB1P53618 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
COPB1P53618 PTMAP2-201ENST00000397627 327 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AL109913.1-201ENST00000421173 514 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AL353193.1-201ENST00000421444 268 ntBASIC4.01□□□□□ -1.77
COPB1P53618 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.01□□□□□ -1.77
COPB1P53618 ELOCP14-201ENST00000428070 331 ntBASIC4.01□□□□□ -1.77
COPB1P53618 ELOCP7-201ENST00000439968 331 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.01□□□□□ -1.77
COPB1P53618 AC112653.1-201ENST00000443851 386 ntBASIC4.01□□□□□ -1.77
COPB1P53618 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.01□□□□□ -1.77
COPB1P53618 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.01□□□□□ -1.77
COPB1P53618 RPL23AP41-201ENST00000484754 458 ntBASIC4.01□□□□□ -1.77
COPB1P53618 PCBP2P3-201ENST00000509726 843 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AC105914.1-201ENST00000511798 226 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.01□□□□□ -1.77
COPB1P53618 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.01□□□□□ -1.77
COPB1P53618 Y_RNA.704-201ENST00000516851 102 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AC109635.3-201ENST00000529536 185 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.01□□□□□ -1.77
COPB1P53618 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.01□□□□□ -1.77
COPB1P53618 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.01□□□□□ -1.77
COPB1P53618 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.01□□□□□ -1.77
COPB1P53618 AL512310.1-201ENST00000548639 172 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.01□□□□□ -1.77
COPB1P53618 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.01□□□□□ -1.77
COPB1P53618 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.01□□□□□ -1.77
COPB1P53618 AC025678.1-201ENST00000567861 338 ntBASIC4.01□□□□□ -1.77
COPB1P53618 MIR3146-201ENST00000580367 79 ntBASIC4.01□□□□□ -1.77
COPB1P53618 MIR3158-1-201ENST00000583596 81 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.01□□□□□ -1.77
COPB1P53618 MIR6875-201ENST00000617506 72 ntBASIC4.01□□□□□ -1.77
COPB1P53618 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms