Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AP1S2P1-201ENST00000457344 379 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.54□□□□□ -1.84
CLCNKAP51800 MTND1P3-201ENST00000484956 952 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.54□□□□□ -1.84
CLCNKAP51800 AC138853.1-201ENST00000503549 823 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCNKAP51800 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.54□□□□□ -1.84
CLCNKAP51800 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCNKAP51800 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCNKAP51800 RN7SKP298-201ENST00000515950 94 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 RNA5SP468-201ENST00000516782 93 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 SNORA18.6-201ENST00000516792 115 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCNKAP51800 DUXAP2-201ENST00000519198 589 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCNKAP51800 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLCNKAP51800 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.54□□□□□ -1.84
CLCNKAP51800 AP003181.2-201ENST00000528941 181 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCNKAP51800 AC245505.1-201ENST00000556398 224 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCNKAP51800 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.54□□□□□ -1.84
CLCNKAP51800 AC060771.1-201ENST00000582031 164 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CLCNKAP51800 AC080078.2-201ENST00000603766 501 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AL021997.1-201ENST00000605757 193 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AC108747.1-201ENST00000609508 535 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AL355472.4-201ENST00000610233 626 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AC009159.1-201ENST00000618386 642 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AC012150.2-201ENST00000621300 544 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AC243312.2-201ENST00000623340 601 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AL359740.1-201ENST00000624340 592 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 AL732372.2-225ENST00000642124 456 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLCNKAP51800 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.54□□□□□ -1.84
CLCNKAP51800 MFSD8-233ENST00000641482 4860 ntBASIC3.54□□□□□ -1.84
CLCNKAP51800 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLCNKAP51800 AL365440.1-201ENST00000436135 2167 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CLCNKAP51800 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.53□□□□□ -1.84
CLCNKAP51800 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CLCNKAP51800 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CLCNKAP51800 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLCNKAP51800 RNU6-1249P-201ENST00000363237 111 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 RNY4P34-201ENST00000364779 95 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCNKAP51800 RNU6-114P-201ENST00000384704 105 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AL583834.1-201ENST00000406943 343 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 RNU4-65P-201ENST00000410473 140 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCNKAP51800 AF274854.1-201ENST00000413236 615 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 RPS29P4-201ENST00000414733 161 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCNKAP51800 HMGN2P20-201ENST00000437531 273 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCNKAP51800 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLCNKAP51800 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLCNKAP51800 RPL17P49-201ENST00000443728 411 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 MTCO3P20-201ENST00000454926 688 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.53□□□□□ -1.84
CLCNKAP51800 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCNKAP51800 HMGB3P15-201ENST00000507326 574 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.53□□□□□ -1.84
CLCNKAP51800 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
CLCNKAP51800 RNU1-61P-201ENST00000516107 151 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 RN7SKP289-201ENST00000517244 295 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.53□□□□□ -1.84
CLCNKAP51800 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.53□□□□□ -1.84
CLCNKAP51800 AC074050.1-201ENST00000563247 211 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AC006116.10-201ENST00000591836 581 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.53□□□□□ -1.84
CLCNKAP51800 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.53□□□□□ -1.84
CLCNKAP51800 AL359999.1-201ENST00000604513 294 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AC090578.1-201ENST00000604955 591 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AC055876.5-201ENST00000605667 259 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 U3.45-201ENST00000607547 219 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AC087241.4-201ENST00000612441 480 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AC013476.2-201ENST00000614456 459 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 PLCE1P1-201ENST00000622094 305 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AC092628.2-201ENST00000622492 339 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AC110994.2-201ENST00000635481 492 ntBASIC3.53□□□□□ -1.84
CLCNKAP51800 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.53□□□□□ -1.84
CLCNKAP51800 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CLCNKAP51800 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.52□□□□□ -1.85
CLCNKAP51800 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CLCNKAP51800 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLCNKAP51800 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CLCNKAP51800 RNU6-1042P-201ENST00000384204 107 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 RNU6-195P-201ENST00000411352 109 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 C1DP2-201ENST00000418167 426 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AL589872.1-201ENST00000426602 288 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.52□□□□□ -1.85
CLCNKAP51800 HMGN2P31-201ENST00000432430 273 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 MTND4LP10-201ENST00000435146 291 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 MTND1P34-201ENST00000438556 671 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 AL049734.2-201ENST00000441066 616 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 NANOGNBP1-201ENST00000448444 480 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.52□□□□□ -1.85
CLCNKAP51800 HMGB3P8-201ENST00000449709 577 ntBASIC3.52□□□□□ -1.85
CLCNKAP51800 GAPDHP17-201ENST00000449858 1001 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms