Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLCN3P51790 RPS4XP5-202ENST00000449995 1334 ntBASIC3.69□□□□□ -1.82
CLCN3P51790 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLCN3P51790 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLCN3P51790 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLCN3P51790 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLCN3P51790 RNU6-853P-201ENST00000364306 107 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 Y_RNA.359-201ENST00000365498 102 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.68□□□□□ -1.82
CLCN3P51790 U3.20-201ENST00000390909 217 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 RPL17P50-201ENST00000396131 546 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 AL136116.1-201ENST00000403591 381 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 Z98941.1-201ENST00000407764 100 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 AC109780.2-201ENST00000413467 845 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 CCDC58P2-201ENST00000417131 366 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 AL121871.1-201ENST00000443413 436 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 FAM103A2P-201ENST00000444122 354 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCN3P51790 RPL7P36-201ENST00000444633 681 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 COX6CP12-201ENST00000446748 202 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCN3P51790 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCN3P51790 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.68□□□□□ -1.82
CLCN3P51790 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCN3P51790 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.68□□□□□ -1.82
CLCN3P51790 RNU6-528P-201ENST00000516926 100 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 RNU6-1003P-201ENST00000517099 105 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.68□□□□□ -1.82
CLCN3P51790 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.68□□□□□ -1.82
CLCN3P51790 AC109635.4-202ENST00000531666 412 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCN3P51790 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.68□□□□□ -1.82
CLCN3P51790 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.68□□□□□ -1.82
CLCN3P51790 MIR4738-201ENST00000579134 87 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.68□□□□□ -1.82
CLCN3P51790 AC110741.2-201ENST00000605278 268 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 AC068276.1-201ENST00000605793 379 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.68□□□□□ -1.82
CLCN3P51790 AL590282.1-201ENST00000610379 1136 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 MIR8057-201ENST00000620957 69 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 AC025048.6-202ENST00000627667 438 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 PABPC1P9-201ENST00000426076 1612 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.68□□□□□ -1.82
CLCN3P51790 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLCN3P51790 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLCN3P51790 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLCN3P51790 AC009902.3-201ENST00000606235 2172 ntBASIC3.68□□□□□ -1.82
CLCN3P51790 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCN3P51790 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCN3P51790 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCN3P51790 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCN3P51790 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCN3P51790 USP8P1-201ENST00000494673 3183 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 CCT4P2-201ENST00000233836 1548 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 Y_RNA.3-201ENST00000362331 103 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 Y_RNA.41-201ENST00000362646 102 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 RNA5SP374-201ENST00000362939 125 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 RNU5F-6P-201ENST00000362979 116 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 SNORA51.2-201ENST00000364595 132 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLCN3P51790 RPL17P12-201ENST00000413391 526 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCN3P51790 C8orf59P1-201ENST00000429930 303 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCN3P51790 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.67□□□□□ -1.82
CLCN3P51790 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCN3P51790 AC112653.1-201ENST00000443851 386 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 SNRPFP4-201ENST00000456366 242 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCN3P51790 AC106872.2-201ENST00000494303 480 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 ARL2BPP4-201ENST00000506854 471 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCN3P51790 AF213884.2-201ENST00000510417 903 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.67□□□□□ -1.82
CLCN3P51790 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCN3P51790 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLCN3P51790 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.67□□□□□ -1.82
CLCN3P51790 AC087481.2-201ENST00000565492 330 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 AC073648.5-201ENST00000603502 305 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 AC107304.1-201ENST00000604229 296 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 NDUFA8P1-201ENST00000605525 367 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 Z99129.1-201ENST00000612510 255 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 AL353748.2-201ENST00000622148 471 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 AC093591.3-201ENST00000634516 308 ntBASIC3.67□□□□□ -1.82
CLCN3P51790 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.67□□□□□ -1.82
CLCN3P51790 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CLCN3P51790 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CLCN3P51790 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CLCN3P51790 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLCN3P51790 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLCN3P51790 FRG1BP-201ENST00000278882 761 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CLCN3P51790 RNU1-70P-201ENST00000362618 164 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.66□□□□□ -1.82
CLCN3P51790 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLCN3P51790 RNY3P10-201ENST00000384764 102 ntBASIC3.66□□□□□ -1.82
CLCN3P51790 MIR128-1-201ENST00000384921 82 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms