Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CX3CR1P49238 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CX3CR1P49238 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CX3CR1P49238 OR10R1P-201ENST00000441524 1141 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 AC009296.1-201ENST00000443146 155 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.48□□□□□ -2.01
CX3CR1P49238 AL109741.2-201ENST00000455561 343 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 MTND4LP3-201ENST00000468320 276 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.48□□□□□ -2.01
CX3CR1P49238 AC083906.5-201ENST00000503722 328 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.48□□□□□ -2.01
CX3CR1P49238 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.48□□□□□ -2.01
CX3CR1P49238 SNORA9.3-201ENST00000516383 129 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 SCARNA15.2-201ENST00000516409 127 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.48□□□□□ -2.01
CX3CR1P49238 HSPE1P20-201ENST00000538133 289 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 AC124947.2-202ENST00000552735 133 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.48□□□□□ -2.01
CX3CR1P49238 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.48□□□□□ -2.01
CX3CR1P49238 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.48□□□□□ -2.01
CX3CR1P49238 MIR3944-201ENST00000581277 108 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 BNIP3P27-201ENST00000599991 412 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 MIR92B-201ENST00000607575 96 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 AL138478.1-201ENST00000612252 832 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 ATP5A1P2-202ENST00000616464 443 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 AL355493.4-201ENST00000618530 292 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 AC013437.2-201ENST00000639587 677 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CX3CR1P49238 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 AL049641.1-201ENST00000441055 1948 ntBASIC2.48□□□□□ -2.01
CX3CR1P49238 AC026241.1-201ENST00000517873 2142 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CX3CR1P49238 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CX3CR1P49238 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CX3CR1P49238 RNU6-952P-201ENST00000391164 108 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 Z85995.1-201ENST00000415547 335 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.47□□□□□ -2.01
CX3CR1P49238 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.47□□□□□ -2.01
CX3CR1P49238 AC099548.1-201ENST00000421443 426 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.47□□□□□ -2.01
CX3CR1P49238 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.47□□□□□ -2.01
CX3CR1P49238 RPS20P5-201ENST00000434808 360 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.47□□□□□ -2.01
CX3CR1P49238 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.47□□□□□ -2.01
CX3CR1P49238 DDX3P2-201ENST00000446138 111 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 AL671855.1-201ENST00000446875 1203 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 WASF1P1-201ENST00000447560 1131 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 EXOSC3P1-201ENST00000448649 500 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 RPL18AP17-201ENST00000455326 198 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 RNU7-136P-201ENST00000458819 69 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 snoU13.8-201ENST00000458890 104 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CX3CR1P49238 SEM1P1-201ENST00000506694 209 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 AC008837.2-201ENST00000513076 418 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 RNA5SP341-201ENST00000516261 117 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 LRRC6P1-201ENST00000532188 885 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.47□□□□□ -2.01
CX3CR1P49238 AL132857.1-201ENST00000555180 708 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.47□□□□□ -2.01
CX3CR1P49238 AC010546.1-201ENST00000569391 485 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.47□□□□□ -2.01
CX3CR1P49238 AC024220.1-201ENST00000603675 484 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 AL137843.1-201ENST00000605078 385 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 AC104763.3-201ENST00000613765 618 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 AC004852.3-201ENST00000614131 326 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 AC022306.3-201ENST00000619930 550 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 UCA1.1-201ENST00000620952 75 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.47□□□□□ -2.01
CX3CR1P49238 AL022578.1-201ENST00000439330 1433 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CX3CR1P49238 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CX3CR1P49238 AC092593.1-201ENST00000515413 1815 ntBASIC2.47□□□□□ -2.01
CX3CR1P49238 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CX3CR1P49238 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.46□□□□□ -2.01
CX3CR1P49238 AC007785.2-201ENST00000598627 1916 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 ZNF519P1-201ENST00000449011 1626 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
CX3CR1P49238 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CX3CR1P49238 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 RNU1-105P-201ENST00000363470 161 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 RNU5E-8P-201ENST00000363502 116 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 Y_RNA.234-201ENST00000364409 97 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 SNORD116-12-201ENST00000384468 92 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 MIR592-201ENST00000384959 97 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 RNU6-1242P-201ENST00000391052 103 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 RNU6-193P-201ENST00000410977 107 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 RNU4-22P-201ENST00000411058 166 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 RPL19P1-201ENST00000411635 428 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.46□□□□□ -2.02
CX3CR1P49238 AC013410.2-201ENST00000422627 201 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 AC008850.1-201ENST00000427546 362 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 HSFY7P-201ENST00000432672 318 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 HSFY8P-201ENST00000437934 318 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.46□□□□□ -2.02
CX3CR1P49238 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.46□□□□□ -2.02
CX3CR1P49238 RPL23AP76-201ENST00000441860 458 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.46□□□□□ -2.02
CX3CR1P49238 HSFY5P-201ENST00000453726 309 ntBASIC2.46□□□□□ -2.02
CX3CR1P49238 BX322784.1-201ENST00000455793 1077 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms