Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AF127577.6-201ENST00000623352 2191 ntBASIC3.34□□□□□ -1.87
LHX1P48742 RNU6-920P-201ENST00000410926 92 ntBASIC3.34□□□□□ -1.87
LHX1P48742 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LHX1P48742 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.34□□□□□ -1.87
LHX1P48742 AC024082.2-201ENST00000434771 238 ntBASIC3.34□□□□□ -1.87
LHX1P48742 RPL7P36-201ENST00000444633 681 ntBASIC3.34□□□□□ -1.87
LHX1P48742 ZNF114P1-201ENST00000453500 292 ntBASIC3.34□□□□□ -1.87
LHX1P48742 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.34□□□□□ -1.87
LHX1P48742 AC004801.2-202ENST00000463559 283 ntBASIC3.34□□□□□ -1.87
LHX1P48742 RPS4XP22-201ENST00000480755 780 ntBASIC3.34□□□□□ -1.87
LHX1P48742 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.34□□□□□ -1.87
LHX1P48742 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.34□□□□□ -1.87
LHX1P48742 VN1R104P-201ENST00000505115 1009 ntBASIC3.34□□□□□ -1.87
LHX1P48742 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.34□□□□□ -1.87
LHX1P48742 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.34□□□□□ -1.87
LHX1P48742 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.34□□□□□ -1.87
LHX1P48742 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.34□□□□□ -1.87
LHX1P48742 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.34□□□□□ -1.87
LHX1P48742 MED28P6-201ENST00000558776 231 ntBASIC3.34□□□□□ -1.87
LHX1P48742 CLIC4P2-201ENST00000601934 717 ntBASIC3.34□□□□□ -1.87
LHX1P48742 AL357094.1-201ENST00000603845 844 ntBASIC3.34□□□□□ -1.87
LHX1P48742 PRELID3BP8-201ENST00000604148 295 ntBASIC3.34□□□□□ -1.87
LHX1P48742 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LHX1P48742 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.34□□□□□ -1.87
LHX1P48742 MIR7844-201ENST00000616161 122 ntBASIC3.34□□□□□ -1.87
LHX1P48742 MIR6130-201ENST00000619419 109 ntBASIC3.34□□□□□ -1.87
LHX1P48742 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.34□□□□□ -1.87
LHX1P48742 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
LHX1P48742 ZNF826P-207ENST00000622273 1910 ntBASIC3.34□□□□□ -1.88
LHX1P48742 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
LHX1P48742 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LHX1P48742 AC010733.2-201ENST00000589496 5702 ntBASIC3.33□□□□□ -1.88
LHX1P48742 MIR422A-201ENST00000362286 90 ntBASIC3.33□□□□□ -1.88
LHX1P48742 RNU6-501P-201ENST00000364072 100 ntBASIC3.33□□□□□ -1.88
LHX1P48742 U8.14-201ENST00000390843 143 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AL031577.2-201ENST00000404133 280 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AL359704.1-201ENST00000411586 781 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AC109780.2-201ENST00000413467 845 ntBASIC3.33□□□□□ -1.88
LHX1P48742 RPS27AP14-201ENST00000422868 454 ntBASIC3.33□□□□□ -1.88
LHX1P48742 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.33□□□□□ -1.88
LHX1P48742 AL445567.1-201ENST00000439121 144 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.33□□□□□ -1.88
LHX1P48742 AL671855.1-201ENST00000446875 1203 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.33□□□□□ -1.88
LHX1P48742 SNRPGP3-201ENST00000469405 227 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.33□□□□□ -1.88
LHX1P48742 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.33□□□□□ -1.88
LHX1P48742 PSMA2P1-201ENST00000526365 646 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.33□□□□□ -1.88
LHX1P48742 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.33□□□□□ -1.88
LHX1P48742 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.33□□□□□ -1.88
LHX1P48742 SYF2P1-201ENST00000550658 413 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.33□□□□□ -1.88
LHX1P48742 AC135628.1-201ENST00000568867 534 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AC060771.1-201ENST00000582031 164 ntBASIC3.33□□□□□ -1.88
LHX1P48742 MIR4307-201ENST00000582802 84 ntBASIC3.33□□□□□ -1.88
LHX1P48742 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.33□□□□□ -1.88
LHX1P48742 AL109653.1-201ENST00000603091 248 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AC091965.4-201ENST00000607691 587 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AL591516.1-201ENST00000611326 274 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AC100793.4-201ENST00000613683 429 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AL450472.3-201ENST00000615578 367 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AC008443.7-201ENST00000622195 246 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AC009902.3-201ENST00000606235 2172 ntBASIC3.33□□□□□ -1.88
LHX1P48742 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LHX1P48742 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.33□□□□□ -1.88
LHX1P48742 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LHX1P48742 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
LHX1P48742 AC009812.4-201ENST00000569134 1805 ntBASIC3.33□□□□□ -1.88
LHX1P48742 AC011460.1-201ENST00000636268 1834 ntBASIC3.33□□□□□ -1.88
LHX1P48742 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LHX1P48742 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
LHX1P48742 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LHX1P48742 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
LHX1P48742 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LHX1P48742 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LHX1P48742 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LHX1P48742 SNORA48.5-201ENST00000391143 135 ntBASIC3.32□□□□□ -1.88
LHX1P48742 RPL7P25-201ENST00000404151 721 ntBASIC3.32□□□□□ -1.88
LHX1P48742 RNA5SP107-201ENST00000411358 122 ntBASIC3.32□□□□□ -1.88
LHX1P48742 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.32□□□□□ -1.88
LHX1P48742 RPL23AP69-201ENST00000431134 458 ntBASIC3.32□□□□□ -1.88
LHX1P48742 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX1P48742 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX1P48742 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.32□□□□□ -1.88
LHX1P48742 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX1P48742 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.32□□□□□ -1.88
LHX1P48742 AP1S2P1-201ENST00000457344 379 ntBASIC3.32□□□□□ -1.88
LHX1P48742 BET1P1-201ENST00000482276 359 ntBASIC3.32□□□□□ -1.88
LHX1P48742 AC108860.1-201ENST00000484521 383 ntBASIC3.32□□□□□ -1.88
LHX1P48742 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX1P48742 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.32□□□□□ -1.88
LHX1P48742 AC105914.1-201ENST00000511798 226 ntBASIC3.32□□□□□ -1.88
LHX1P48742 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX1P48742 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.32□□□□□ -1.88
LHX1P48742 HIGD1AP10-201ENST00000527837 282 ntBASIC3.32□□□□□ -1.88
LHX1P48742 AP002404.1-201ENST00000532005 451 ntBASIC3.32□□□□□ -1.88
LHX1P48742 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.32□□□□□ -1.88
LHX1P48742 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.32□□□□□ -1.88
LHX1P48742 AC125611.2-201ENST00000551907 647 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms