Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC093156.1-201ENST00000440382 670 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN9P43378 TPT1P14-201ENST00000448018 505 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 RPS24P6-201ENST00000452670 400 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AC108059.3-201ENST00000456388 214 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.73□□□□□ -1.81
PTPN9P43378 RPL23AP62-201ENST00000463396 453 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 RN7SL594P-201ENST00000470590 287 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AC084357.1-201ENST00000473404 255 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 RPS3AP50-201ENST00000487064 803 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN9P43378 RNU1-95P-201ENST00000516357 160 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 RNU1-128P-201ENST00000516704 160 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 HMGN1P28-201ENST00000521340 364 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AP003181.2-201ENST00000528941 181 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN9P43378 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN9P43378 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.73□□□□□ -1.81
PTPN9P43378 AC087481.2-201ENST00000565492 330 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.73□□□□□ -1.81
PTPN9P43378 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.73□□□□□ -1.81
PTPN9P43378 MIR4738-201ENST00000579134 87 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AC006130.2-201ENST00000586202 326 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.73□□□□□ -1.81
PTPN9P43378 AC090970.3-201ENST00000612566 866 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AC008498.1-201ENST00000613012 531 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AC093838.1-201ENST00000613014 469 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 AC091953.2-201ENST00000623979 160 ntBASIC3.73□□□□□ -1.81
PTPN9P43378 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN9P43378 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN9P43378 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN9P43378 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN9P43378 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN9P43378 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
PTPN9P43378 AC073073.2-201ENST00000609827 2578 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN9P43378 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN9P43378 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN9P43378 MFSD8-233ENST00000641482 4860 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN9P43378 RNU6-629P-201ENST00000384061 103 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 MIR554-201ENST00000384874 96 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPN9P43378 RNU2-43P-201ENST00000410306 190 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 RN7SKP53-201ENST00000411337 315 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 RNU6-516P-201ENST00000411381 104 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPN9P43378 MTND3P17-201ENST00000416968 344 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN9P43378 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.72□□□□□ -1.81
PTPN9P43378 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN9P43378 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN9P43378 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN9P43378 CYCSP4-201ENST00000429682 331 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 ARF4P2-201ENST00000430209 526 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.72□□□□□ -1.81
PTPN9P43378 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPN9P43378 RPL21P112-201ENST00000434403 463 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.72□□□□□ -1.81
PTPN9P43378 TIMM9P1-201ENST00000436122 256 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 RPS29P31-201ENST00000446147 164 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN9P43378 AL136380.1-201ENST00000447970 162 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AC007967.1-201ENST00000455422 1159 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AC023598.1-201ENST00000472521 361 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 RPL31P13-201ENST00000484151 370 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AP001086.1-201ENST00000494882 321 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPN9P43378 RN7SKP18-201ENST00000516005 275 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPN9P43378 AC107934.1-201ENST00000522215 217 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 MED28P5-201ENST00000528254 438 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 MTCYBP41-201ENST00000528913 1123 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPN9P43378 AP000857.1-201ENST00000532151 543 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPN9P43378 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.72□□□□□ -1.81
PTPN9P43378 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN9P43378 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.72□□□□□ -1.81
PTPN9P43378 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN9P43378 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN9P43378 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN9P43378 AC245014.2-201ENST00000603689 287 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AL161729.4-201ENST00000604650 476 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AC246785.4-201ENST00000605374 287 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AC007038.2-201ENST00000608095 740 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AC108747.1-201ENST00000609508 535 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN9P43378 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPN9P43378 AL603758.1-201ENST00000618654 241 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AC136475.10-201ENST00000620253 385 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 AC034229.5-201ENST00000624258 185 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PTPN9P43378 USP8P1-201ENST00000494673 3183 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 MFSD8-236ENST00000641509 4050 ntBASIC3.72□□□□□ -1.81
PTPN9P43378 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
PTPN9P43378 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PTPN9P43378 ZNF285B-201ENST00000561698 1767 ntBASIC3.71□□□□□ -1.81
PTPN9P43378 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PTPN9P43378 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms