Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC106782.4-201ENST00000568264 210 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.71□□□□□ -1.98
SHMT2P34897 AC245884.10-201ENST00000597355 337 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AC011458.1-201ENST00000604034 617 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AC106028.5-201ENST00000610332 395 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AC004696.1-201ENST00000614345 607 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 AC068831.7-201ENST00000616954 363 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHMT2P34897 AL355493.4-201ENST00000618530 292 ntBASIC2.71□□□□□ -1.98
SHMT2P34897 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.71□□□□□ -1.98
SHMT2P34897 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SHMT2P34897 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.71□□□□□ -1.98
SHMT2P34897 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHMT2P34897 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
SHMT2P34897 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.7□□□□□ -1.98
SHMT2P34897 AL513185.3-201ENST00000433335 1300 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 AC092593.1-201ENST00000515413 1815 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SHMT2P34897 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHMT2P34897 FRG1BP-201ENST00000278882 761 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHMT2P34897 RNU6-28P-201ENST00000362378 107 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SHMT2P34897 RNU6-952P-201ENST00000391164 108 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 MIR1284-201ENST00000408337 120 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 RNU2-43P-201ENST00000410306 190 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 AL139421.1-201ENST00000423010 169 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.7□□□□□ -1.98
SHMT2P34897 ATP5F1P1-201ENST00000433775 569 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.7□□□□□ -1.98
SHMT2P34897 RPL36AP6-201ENST00000435770 321 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 SNRPEP4-201ENST00000435815 279 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 MTCYBP34-201ENST00000439552 670 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 BX322784.1-201ENST00000455793 1077 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.7□□□□□ -1.98
SHMT2P34897 RPL31P50-201ENST00000471002 296 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 RPS27AP9-201ENST00000477681 438 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.7□□□□□ -1.98
SHMT2P34897 ARL4AP2-201ENST00000507378 601 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 AC116353.3-201ENST00000511215 249 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.7□□□□□ -1.98
SHMT2P34897 RNU6-56P-201ENST00000516986 93 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.7□□□□□ -1.98
SHMT2P34897 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.7□□□□□ -1.98
SHMT2P34897 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.7□□□□□ -1.98
SHMT2P34897 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHMT2P34897 AL132857.1-201ENST00000555180 708 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.7□□□□□ -1.98
SHMT2P34897 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.7□□□□□ -1.98
SHMT2P34897 CYCSP39-201ENST00000565821 309 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 MTND1P8-201ENST00000571424 950 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 ZNF861P-201ENST00000588126 639 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.7□□□□□ -1.98
SHMT2P34897 AL359198.2-201ENST00000611836 194 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 AL357080.1-201ENST00000617394 239 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 AC006386.1-201ENST00000619436 415 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 AC231657.1-201ENST00000624313 397 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 AC005539.1-201ENST00000443768 1479 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 AL365361.1-201ENST00000566942 3481 ntBASIC2.7□□□□□ -1.98
SHMT2P34897 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHMT2P34897 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SHMT2P34897 OR5J1P-201ENST00000313544 939 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 Y_RNA.234-201ENST00000364409 97 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SHMT2P34897 RNU6-636P-201ENST00000384598 107 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SHMT2P34897 MTND4P13-201ENST00000402078 1023 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 RPS3AP24-201ENST00000407896 734 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.69□□□□□ -1.98
SHMT2P34897 ELOCP9-201ENST00000418624 239 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AL953862.1-201ENST00000423016 168 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SHMT2P34897 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.69□□□□□ -1.98
SHMT2P34897 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.69□□□□□ -1.98
SHMT2P34897 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 RPS25P9-201ENST00000435591 252 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 MTCO2P20-201ENST00000437339 673 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 MRPL50P4-201ENST00000446432 475 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 DUXAP8-207ENST00000456786 622 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.69□□□□□ -1.98
SHMT2P34897 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.69□□□□□ -1.98
SHMT2P34897 SNORA9.3-201ENST00000516383 129 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 SNORA70.16-201ENST00000516390 95 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 COX6CP8-201ENST00000522620 226 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AC022690.1-201ENST00000526681 550 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SHMT2P34897 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.69□□□□□ -1.98
SHMT2P34897 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.69□□□□□ -1.98
SHMT2P34897 GTF3AP2-201ENST00000557014 266 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AL049838.1-201ENST00000563647 981 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AC138761.3-201ENST00000579993 334 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AC009220.3-201ENST00000604318 586 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AL137843.1-201ENST00000605078 385 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AC008277.2-201ENST00000605196 797 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 RPL23AP88-201ENST00000605759 454 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.69□□□□□ -1.98
SHMT2P34897 AC245297.2-201ENST00000610119 565 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 TUG1_1.1-201ENST00000610654 145 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms