Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXA9P31269 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXA9P31269 AC092393.1-201ENST00000439625 742 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 AL645638.1-201ENST00000440519 361 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
HOXA9P31269 GSTA11P-201ENST00000452866 669 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXA9P31269 AC069528.1-202ENST00000482888 637 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.73□□□□□ -1.97
HOXA9P31269 TPT1P8-201ENST00000510120 555 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 MTCO3P44-201ENST00000510977 541 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.73□□□□□ -1.97
HOXA9P31269 RN7SKP31-201ENST00000516354 278 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXA9P31269 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXA9P31269 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXA9P31269 AC090502.2-201ENST00000549267 280 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 AL049838.1-201ENST00000563647 981 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXA9P31269 SNORD53-201ENST00000579969 78 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 MIR4635-201ENST00000583759 79 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.73□□□□□ -1.97
HOXA9P31269 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXA9P31269 MTND3P19-201ENST00000603825 345 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 AL035411.2-201ENST00000604022 421 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 AC091946.2-201ENST00000606105 291 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 AP000240.1-201ENST00000609910 452 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 MIR6715A-201ENST00000615929 79 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 AC068722.2-201ENST00000618734 544 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 AL078595.3-201ENST00000623815 1166 ntBASIC2.73□□□□□ -1.97
HOXA9P31269 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXA9P31269 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXA9P31269 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HOXA9P31269 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXA9P31269 AC108206.1-201ENST00000570186 4159 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC130650.2-201ENST00000618736 2403 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 RPL9P7-201ENST00000330965 580 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 RNU6-1180P-201ENST00000364935 107 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 RNU6-657P-201ENST00000383904 107 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 SNORD21-201ENST00000383953 95 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AL512633.1-201ENST00000399931 655 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 RNU6-584P-201ENST00000410350 95 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 DBF4P1-201ENST00000412976 1892 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AL513477.1-202ENST00000417061 214 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC009963.1-201ENST00000417265 157 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 Z75741.2-201ENST00000417272 1167 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 MTCO3P1-205ENST00000422088 832 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HOXA9P31269 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXA9P31269 DPRXP1-201ENST00000426312 460 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC006548.1-201ENST00000427470 102 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 LSM1P1-201ENST00000438629 273 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AL589880.1-201ENST00000448271 287 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
HOXA9P31269 MTCO3P2-201ENST00000457365 171 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC008481.1-201ENST00000463278 396 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXA9P31269 BOLA3P3-201ENST00000505182 232 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXA9P31269 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXA9P31269 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.72□□□□□ -1.97
HOXA9P31269 AC008413.1-201ENST00000511864 177 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC008549.1-201ENST00000512900 643 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXA9P31269 RNA5SP320-201ENST00000516263 124 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXA9P31269 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXA9P31269 ARL2BPP5-201ENST00000523141 481 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 OR4A45P-201ENST00000529954 901 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC128657.1-201ENST00000549459 145 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXA9P31269 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXA9P31269 SULT1C2P1-202ENST00000562418 459 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 MTND1P8-201ENST00000571424 950 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 GLUD1P4-201ENST00000590914 418 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.72□□□□□ -1.97
HOXA9P31269 RPP40P2-201ENST00000603596 712 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC007621.1-201ENST00000604544 437 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC106052.1-201ENST00000608029 497 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC092954.1-201ENST00000609121 445 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC024257.5-201ENST00000612739 531 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 AC023158.2-201ENST00000614876 543 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXA9P31269 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 OR1S1-201ENST00000624470 978 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 CR381572.1-201ENST00000625098 102 ntBASIC2.72□□□□□ -1.97
HOXA9P31269 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.72□□□□□ -1.97
HOXA9P31269 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HOXA9P31269 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HOXA9P31269 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HOXA9P31269 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HOXA9P31269 RNVU1-3-201ENST00000364313 161 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 RNU1-100P-201ENST00000365255 165 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 RNU6-1242P-201ENST00000391052 103 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 TMSB4XP8-201ENST00000402089 135 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 AL136310.1-201ENST00000404926 654 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 RN7SKP192-201ENST00000411291 327 ntBASIC2.71□□□□□ -1.98
HOXA9P31269 TMSB4XP6-201ENST00000415187 135 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms