Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC126124.2-201ENST00000413542 321 ntBASIC3.04□□□□□ -1.92
SHC1P29353 TPMTP2-201ENST00000414372 726 ntBASIC3.04□□□□□ -1.92
SHC1P29353 HMGB3P23-201ENST00000414981 585 ntBASIC3.04□□□□□ -1.92
SHC1P29353 RPS3AP9-201ENST00000417027 792 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.04□□□□□ -1.92
SHC1P29353 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.04□□□□□ -1.92
SHC1P29353 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.04□□□□□ -1.92
SHC1P29353 RPL21P112-201ENST00000434403 463 ntBASIC3.04□□□□□ -1.92
SHC1P29353 RPL23AP22-201ENST00000437556 453 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC244505.5-201ENST00000443639 207 ntBASIC3.04□□□□□ -1.92
SHC1P29353 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.04□□□□□ -1.92
SHC1P29353 AC093392.2-201ENST00000450682 337 ntBASIC3.04□□□□□ -1.92
SHC1P29353 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.04□□□□□ -1.92
SHC1P29353 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.04□□□□□ -1.92
SHC1P29353 AC026410.2-201ENST00000460281 156 ntBASIC3.04□□□□□ -1.92
SHC1P29353 RPL21P10-201ENST00000463521 490 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AL136126.1-201ENST00000473603 402 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC078785.3-201ENST00000476607 425 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC114981.1-201ENST00000503897 678 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC114967.1-201ENST00000504890 259 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC021678.1-201ENST00000505195 936 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.04□□□□□ -1.92
SHC1P29353 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHC1P29353 AC109464.2-201ENST00000510242 943 ntBASIC3.04□□□□□ -1.92
SHC1P29353 FCF1P8-201ENST00000510322 597 ntBASIC3.04□□□□□ -1.92
SHC1P29353 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.04□□□□□ -1.92
SHC1P29353 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.04□□□□□ -1.92
SHC1P29353 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.04□□□□□ -1.92
SHC1P29353 MIR3913-1-201ENST00000577744 102 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.04□□□□□ -1.92
SHC1P29353 MIR4801-201ENST00000582704 82 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.04□□□□□ -1.92
SHC1P29353 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.04□□□□□ -1.92
SHC1P29353 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.04□□□□□ -1.92
SHC1P29353 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.04□□□□□ -1.92
SHC1P29353 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.04□□□□□ -1.92
SHC1P29353 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.04□□□□□ -1.92
SHC1P29353 AC024220.1-201ENST00000603675 484 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC011816.2-201ENST00000607089 556 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC007684.1-201ENST00000609671 477 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC019176.2-201ENST00000611579 315 ntBASIC3.04□□□□□ -1.92
SHC1P29353 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.04□□□□□ -1.92
SHC1P29353 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.04□□□□□ -1.92
SHC1P29353 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.04□□□□□ -1.92
SHC1P29353 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.04□□□□□ -1.92
SHC1P29353 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.04□□□□□ -1.92
SHC1P29353 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHC1P29353 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
SHC1P29353 AL049781.1-201ENST00000623195 3585 ntBASIC3.04□□□□□ -1.92
SHC1P29353 AC005183.1-201ENST00000603687 1979 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AL353746.1-201ENST00000566293 6881 ntBASIC3.03□□□□□ -1.92
SHC1P29353 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.03□□□□□ -1.92
SHC1P29353 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
SHC1P29353 MIR148B-201ENST00000362252 99 ntBASIC3.03□□□□□ -1.92
SHC1P29353 RNA5SP383-201ENST00000362934 120 ntBASIC3.03□□□□□ -1.92
SHC1P29353 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHC1P29353 RNU6-1042P-201ENST00000384204 107 ntBASIC3.03□□□□□ -1.92
SHC1P29353 RNU6-1226P-201ENST00000384317 107 ntBASIC3.03□□□□□ -1.92
SHC1P29353 MIR7-3-201ENST00000384898 110 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AL023807.1-201ENST00000407932 359 ntBASIC3.03□□□□□ -1.92
SHC1P29353 MIR548F1-201ENST00000408667 84 ntBASIC3.03□□□□□ -1.92
SHC1P29353 RN7SKP111-201ENST00000410349 271 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.03□□□□□ -1.92
SHC1P29353 MTND1P23-201ENST00000416931 372 ntBASIC3.03□□□□□ -1.92
SHC1P29353 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.03□□□□□ -1.92
SHC1P29353 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.03□□□□□ -1.92
SHC1P29353 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.03□□□□□ -1.92
SHC1P29353 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.03□□□□□ -1.92
SHC1P29353 AC109583.1-201ENST00000432156 268 ntBASIC3.03□□□□□ -1.92
SHC1P29353 FTH1P1-201ENST00000437933 532 ntBASIC3.03□□□□□ -1.92
SHC1P29353 MTATP6P13-201ENST00000438531 667 ntBASIC3.03□□□□□ -1.92
SHC1P29353 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.03□□□□□ -1.92
SHC1P29353 DNAJC19P4-201ENST00000440115 345 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHC1P29353 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.03□□□□□ -1.92
SHC1P29353 AL033528.1-201ENST00000453780 140 ntBASIC3.03□□□□□ -1.92
SHC1P29353 OR6K1P-201ENST00000456766 971 ntBASIC3.03□□□□□ -1.92
SHC1P29353 RPL23AP67-201ENST00000465341 474 ntBASIC3.03□□□□□ -1.92
SHC1P29353 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHC1P29353 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.03□□□□□ -1.92
SHC1P29353 LARP1BP2-201ENST00000486594 519 ntBASIC3.03□□□□□ -1.92
SHC1P29353 HMGB1P36-201ENST00000487709 576 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.03□□□□□ -1.92
SHC1P29353 AC034159.1-201ENST00000513885 583 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.03□□□□□ -1.92
SHC1P29353 AC068657.1-201ENST00000520807 306 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.03□□□□□ -1.92
SHC1P29353 ZNF705CP-201ENST00000530515 889 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AP002453.2-201ENST00000533503 320 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.03□□□□□ -1.92
SHC1P29353 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.03□□□□□ -1.92
SHC1P29353 AC008127.2-201ENST00000549925 1075 ntBASIC3.03□□□□□ -1.92
SHC1P29353 EEF1B2P4-201ENST00000551398 348 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AC087883.1-201ENST00000551882 391 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.03□□□□□ -1.92
SHC1P29353 ZNF192P1-203ENST00000565888 810 ntBASIC3.03□□□□□ -1.92
SHC1P29353 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.03□□□□□ -1.92
SHC1P29353 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms