Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
RXRBP28702 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.58□□□□□ -1.52
RXRBP28702 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RXRBP28702 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RXRBP28702 AC004972.1-201ENST00000623934 2209 ntBASIC5.58□□□□□ -1.52
RXRBP28702 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RXRBP28702 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.58□□□□□ -1.52
RXRBP28702 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RXRBP28702 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RXRBP28702 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
RXRBP28702 RNY1P12-201ENST00000364251 105 ntBASIC5.58□□□□□ -1.52
RXRBP28702 RNU6-702P-201ENST00000364982 107 ntBASIC5.58□□□□□ -1.52
RXRBP28702 ARF4P3-201ENST00000397387 509 ntBASIC5.58□□□□□ -1.52
RXRBP28702 RPL31P52-201ENST00000407532 367 ntBASIC5.58□□□□□ -1.52
RXRBP28702 HMGB3P2-201ENST00000411913 584 ntBASIC5.58□□□□□ -1.52
RXRBP28702 PRELID3BP11-201ENST00000414230 479 ntBASIC5.58□□□□□ -1.52
RXRBP28702 AL158156.1-201ENST00000422509 473 ntBASIC5.58□□□□□ -1.52
RXRBP28702 HMGB3P11-201ENST00000440127 604 ntBASIC5.58□□□□□ -1.52
RXRBP28702 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.58□□□□□ -1.52
RXRBP28702 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.58□□□□□ -1.52
RXRBP28702 SUMO1P2-201ENST00000452524 304 ntBASIC5.58□□□□□ -1.52
RXRBP28702 ELOCP24-201ENST00000456370 334 ntBASIC5.58□□□□□ -1.52
RXRBP28702 AC006512.1-201ENST00000468816 291 ntBASIC5.58□□□□□ -1.52
RXRBP28702 RN7SKP219-201ENST00000516825 296 ntBASIC5.58□□□□□ -1.52
RXRBP28702 RNU6-1271P-201ENST00000517049 105 ntBASIC5.58□□□□□ -1.52
RXRBP28702 RN7SKP295-201ENST00000517264 153 ntBASIC5.58□□□□□ -1.52
RXRBP28702 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.58□□□□□ -1.52
RXRBP28702 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.58□□□□□ -1.52
RXRBP28702 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.58□□□□□ -1.52
RXRBP28702 AP005435.4-201ENST00000529514 284 ntBASIC5.58□□□□□ -1.52
RXRBP28702 AC005868.1-201ENST00000536421 331 ntBASIC5.58□□□□□ -1.52
RXRBP28702 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.58□□□□□ -1.52
RXRBP28702 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.58□□□□□ -1.52
RXRBP28702 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.58□□□□□ -1.52
RXRBP28702 AL365434.2-201ENST00000607979 234 ntBASIC5.58□□□□□ -1.52
RXRBP28702 AC022418.1-201ENST00000624118 445 ntBASIC5.58□□□□□ -1.52
RXRBP28702 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.58□□□□□ -1.52
RXRBP28702 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.58□□□□□ -1.52
RXRBP28702 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RXRBP28702 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RXRBP28702 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.58□□□□□ -1.52
RXRBP28702 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RXRBP28702 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.58□□□□□ -1.52
RXRBP28702 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RXRBP28702 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RXRBP28702 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.57□□□□□ -1.52
RXRBP28702 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.57□□□□□ -1.52
RXRBP28702 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RXRBP28702 RNU6-249P-201ENST00000363016 102 ntBASIC5.57□□□□□ -1.52
RXRBP28702 Y_RNA.158-201ENST00000363651 101 ntBASIC5.57□□□□□ -1.52
RXRBP28702 Y_RNA.167-201ENST00000363735 109 ntBASIC5.57□□□□□ -1.52
RXRBP28702 Y_RNA.367-201ENST00000365544 101 ntBASIC5.57□□□□□ -1.52
RXRBP28702 RNU4-48P-201ENST00000365559 182 ntBASIC5.57□□□□□ -1.52
RXRBP28702 SNORA63.7-201ENST00000365579 123 ntBASIC5.57□□□□□ -1.52
RXRBP28702 Y_RNA.373-201ENST00000365600 103 ntBASIC5.57□□□□□ -1.52
RXRBP28702 Y_RNA.510-201ENST00000384511 114 ntBASIC5.57□□□□□ -1.52
RXRBP28702 AL078604.1-201ENST00000404609 466 ntBASIC5.57□□□□□ -1.52
RXRBP28702 RN7SKP158-201ENST00000410453 326 ntBASIC5.57□□□□□ -1.52
RXRBP28702 COX5BP7-201ENST00000414780 274 ntBASIC5.57□□□□□ -1.52
RXRBP28702 RPL31P12-201ENST00000422587 358 ntBASIC5.57□□□□□ -1.52
RXRBP28702 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.57□□□□□ -1.52
RXRBP28702 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.57□□□□□ -1.52
RXRBP28702 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC5.57□□□□□ -1.52
RXRBP28702 AL031663.1-201ENST00000437445 219 ntBASIC5.57□□□□□ -1.52
RXRBP28702 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.57□□□□□ -1.52
RXRBP28702 RPL32P34-201ENST00000486380 400 ntBASIC5.57□□□□□ -1.52
RXRBP28702 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.57□□□□□ -1.52
RXRBP28702 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.57□□□□□ -1.52
RXRBP28702 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.57□□□□□ -1.52
RXRBP28702 AP000859.1-201ENST00000525536 307 ntBASIC5.57□□□□□ -1.52
RXRBP28702 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.57□□□□□ -1.52
RXRBP28702 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.57□□□□□ -1.52
RXRBP28702 AC073539.2-201ENST00000597113 165 ntBASIC5.57□□□□□ -1.52
RXRBP28702 Z69720.2-201ENST00000624755 279 ntBASIC5.57□□□□□ -1.52
RXRBP28702 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RXRBP28702 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.57□□□□□ -1.52
RXRBP28702 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RXRBP28702 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RXRBP28702 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RXRBP28702 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RXRBP28702 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RXRBP28702 Z82217.1-201ENST00000625157 8149 ntBASIC5.56□□□□□ -1.52
RXRBP28702 AC112198.2-201ENST00000426589 6996 ntBASIC5.56□□□□□ -1.52
RXRBP28702 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
RXRBP28702 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RXRBP28702 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RXRBP28702 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RXRBP28702 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RXRBP28702 AC090337.1-201ENST00000579651 2074 ntBASIC5.56□□□□□ -1.52
RXRBP28702 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.56□□□□□ -1.52
RXRBP28702 Y_RNA.5-201ENST00000362334 102 ntBASIC5.56□□□□□ -1.52
RXRBP28702 RNU6-1188P-201ENST00000363795 107 ntBASIC5.56□□□□□ -1.52
RXRBP28702 Y_RNA.414-201ENST00000384011 101 ntBASIC5.56□□□□□ -1.52
RXRBP28702 Y_RNA.557-201ENST00000384680 107 ntBASIC5.56□□□□□ -1.52
RXRBP28702 RN7SKP16-201ENST00000410180 299 ntBASIC5.56□□□□□ -1.52
RXRBP28702 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.56□□□□□ -1.52
RXRBP28702 RPS15AP12-201ENST00000419498 388 ntBASIC5.56□□□□□ -1.52
RXRBP28702 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.56□□□□□ -1.52
RXRBP28702 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RXRBP28702 PRPS1P1-201ENST00000445305 876 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms