Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 HMGB1P28-201ENST00000507778 552 ntBASIC2.4□□□□□ -2.03
USF1P22415 RN7SKP31-201ENST00000516354 278 ntBASIC2.4□□□□□ -2.03
USF1P22415 SLC2A13P1-201ENST00000531560 322 ntBASIC2.4□□□□□ -2.03
USF1P22415 NBEAP1-201ENST00000554452 979 ntBASIC2.4□□□□□ -2.03
USF1P22415 CYCSP39-201ENST00000565821 309 ntBASIC2.4□□□□□ -2.03
USF1P22415 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.4□□□□□ -2.03
USF1P22415 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.4□□□□□ -2.03
USF1P22415 U73023.1-201ENST00000603134 700 ntBASIC2.4□□□□□ -2.03
USF1P22415 AC093673.2-201ENST00000609674 331 ntBASIC2.4□□□□□ -2.03
USF1P22415 AC013412.1-201ENST00000610687 192 ntBASIC2.4□□□□□ -2.03
USF1P22415 RNU6-1192P-201ENST00000612197 107 ntBASIC2.4□□□□□ -2.03
USF1P22415 AC023158.2-201ENST00000614876 543 ntBASIC2.4□□□□□ -2.03
USF1P22415 RNU6-489P-201ENST00000618289 107 ntBASIC2.4□□□□□ -2.03
USF1P22415 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
USF1P22415 AC010680.1-201ENST00000590024 3590 ntBASIC2.4□□□□□ -2.03
USF1P22415 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.4□□□□□ -2.03
USF1P22415 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.39□□□□□ -2.03
USF1P22415 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USF1P22415 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USF1P22415 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
USF1P22415 RNU5A-1-201ENST00000362698 116 ntBASIC2.39□□□□□ -2.03
USF1P22415 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
USF1P22415 RNU6-76P-201ENST00000384060 104 ntBASIC2.39□□□□□ -2.03
USF1P22415 DHFRP6-201ENST00000401776 268 ntBASIC2.39□□□□□ -2.03
USF1P22415 HMGB1P17-201ENST00000403495 628 ntBASIC2.39□□□□□ -2.03
USF1P22415 SNORD88.1-201ENST00000408684 91 ntBASIC2.39□□□□□ -2.03
USF1P22415 BX682237.1-201ENST00000415016 335 ntBASIC2.39□□□□□ -2.03
USF1P22415 AL356867.1-201ENST00000429623 299 ntBASIC2.39□□□□□ -2.03
USF1P22415 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.39□□□□□ -2.03
USF1P22415 AC090774.1-201ENST00000435925 246 ntBASIC2.39□□□□□ -2.03
USF1P22415 MTND4P6-201ENST00000438297 472 ntBASIC2.39□□□□□ -2.03
USF1P22415 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.39□□□□□ -2.03
USF1P22415 AL162389.1-201ENST00000449233 177 ntBASIC2.39□□□□□ -2.03
USF1P22415 RNU6-420P-201ENST00000458780 107 ntBASIC2.39□□□□□ -2.03
USF1P22415 SNORD109B-201ENST00000458961 67 ntBASIC2.39□□□□□ -2.03
USF1P22415 SNORD109A-201ENST00000459128 67 ntBASIC2.39□□□□□ -2.03
USF1P22415 AC108734.3-201ENST00000481241 1165 ntBASIC2.39□□□□□ -2.03
USF1P22415 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.39□□□□□ -2.03
USF1P22415 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USF1P22415 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.39□□□□□ -2.03
USF1P22415 RAC1P5-201ENST00000512182 576 ntBASIC2.39□□□□□ -2.03
USF1P22415 AC114781.4-201ENST00000513707 639 ntBASIC2.39□□□□□ -2.03
USF1P22415 RNU6-826P-201ENST00000516827 104 ntBASIC2.39□□□□□ -2.03
USF1P22415 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.39□□□□□ -2.03
USF1P22415 AC079600.2-201ENST00000550076 130 ntBASIC2.39□□□□□ -2.03
USF1P22415 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.39□□□□□ -2.03
USF1P22415 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.39□□□□□ -2.03
USF1P22415 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.39□□□□□ -2.03
USF1P22415 AC090615.1-201ENST00000577519 154 ntBASIC2.39□□□□□ -2.03
USF1P22415 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.39□□□□□ -2.03
USF1P22415 AC026790.2-201ENST00000606282 430 ntBASIC2.39□□□□□ -2.03
USF1P22415 AL161629.2-201ENST00000615347 275 ntBASIC2.39□□□□□ -2.03
USF1P22415 AL450472.3-201ENST00000615578 367 ntBASIC2.39□□□□□ -2.03
USF1P22415 MIR6130-201ENST00000619419 109 ntBASIC2.39□□□□□ -2.03
USF1P22415 AC010338.1-201ENST00000621823 717 ntBASIC2.39□□□□□ -2.03
USF1P22415 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.39□□□□□ -2.03
USF1P22415 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USF1P22415 AC005832.2-201ENST00000538921 1430 ntBASIC2.39□□□□□ -2.03
USF1P22415 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.39□□□□□ -2.03
USF1P22415 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USF1P22415 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.39□□□□□ -2.03
USF1P22415 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
USF1P22415 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USF1P22415 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
USF1P22415 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USF1P22415 RNU6-28P-201ENST00000362378 107 ntBASIC2.38□□□□□ -2.03
USF1P22415 RNU4-82P-201ENST00000362443 140 ntBASIC2.38□□□□□ -2.03
USF1P22415 snoZ40.1-201ENST00000364540 72 ntBASIC2.38□□□□□ -2.03
USF1P22415 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USF1P22415 RNU6-224P-201ENST00000384055 107 ntBASIC2.38□□□□□ -2.03
USF1P22415 RNU6-1122P-201ENST00000384449 107 ntBASIC2.38□□□□□ -2.03
USF1P22415 SNORA40.4-201ENST00000390971 128 ntBASIC2.38□□□□□ -2.03
USF1P22415 AL031679.1-201ENST00000400616 525 ntBASIC2.38□□□□□ -2.03
USF1P22415 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USF1P22415 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.38□□□□□ -2.03
USF1P22415 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.38□□□□□ -2.03
USF1P22415 NDUFB4P7-201ENST00000423198 363 ntBASIC2.38□□□□□ -2.03
USF1P22415 AL590383.1-201ENST00000428602 75 ntBASIC2.38□□□□□ -2.03
USF1P22415 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.38□□□□□ -2.03
USF1P22415 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.38□□□□□ -2.03
USF1P22415 MTCYBP45-201ENST00000435243 565 ntBASIC2.38□□□□□ -2.03
USF1P22415 AC009237.8-201ENST00000445492 379 ntBASIC2.38□□□□□ -2.03
USF1P22415 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.38□□□□□ -2.03
USF1P22415 AC108938.1-201ENST00000451204 136 ntBASIC2.38□□□□□ -2.03
USF1P22415 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.38□□□□□ -2.03
USF1P22415 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.38□□□□□ -2.03
USF1P22415 HSPE1P6-201ENST00000479457 291 ntBASIC2.38□□□□□ -2.03
USF1P22415 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USF1P22415 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.38□□□□□ -2.03
USF1P22415 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.38□□□□□ -2.03
USF1P22415 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.38□□□□□ -2.03
USF1P22415 LRRC6P1-201ENST00000532188 885 ntBASIC2.38□□□□□ -2.03
USF1P22415 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.38□□□□□ -2.03
USF1P22415 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.38□□□□□ -2.03
USF1P22415 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USF1P22415 MIR3124-201ENST00000582636 67 ntBASIC2.38□□□□□ -2.03
USF1P22415 AC083760.1-201ENST00000589621 670 ntBASIC2.38□□□□□ -2.03
USF1P22415 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.38□□□□□ -2.03
USF1P22415 AC020895.1-201ENST00000595362 272 ntBASIC2.38□□□□□ -2.03
USF1P22415 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms