Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AF228730.4-201ENST00000421457 183 ntBASIC4.5□□□□□ -1.69
ATF4P18848 AL590632.1-201ENST00000424289 371 ntBASIC4.5□□□□□ -1.69
ATF4P18848 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.5□□□□□ -1.69
ATF4P18848 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.5□□□□□ -1.69
ATF4P18848 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.5□□□□□ -1.69
ATF4P18848 AC023141.8-201ENST00000442554 208 ntBASIC4.5□□□□□ -1.69
ATF4P18848 BRK1P2-201ENST00000442875 223 ntBASIC4.5□□□□□ -1.69
ATF4P18848 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.5□□□□□ -1.69
ATF4P18848 SNORD125-201ENST00000459538 96 ntBASIC4.5□□□□□ -1.69
ATF4P18848 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.5□□□□□ -1.69
ATF4P18848 AC027575.1-201ENST00000481064 460 ntBASIC4.5□□□□□ -1.69
ATF4P18848 AC139453.3-201ENST00000493276 369 ntBASIC4.5□□□□□ -1.69
ATF4P18848 AC092436.3-201ENST00000511788 257 ntBASIC4.5□□□□□ -1.69
ATF4P18848 RNU6-572P-201ENST00000516724 80 ntBASIC4.5□□□□□ -1.69
ATF4P18848 MIR2117-201ENST00000516780 80 ntBASIC4.5□□□□□ -1.69
ATF4P18848 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.5□□□□□ -1.69
ATF4P18848 CASP1P1-201ENST00000526345 212 ntBASIC4.5□□□□□ -1.69
ATF4P18848 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.5□□□□□ -1.69
ATF4P18848 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.5□□□□□ -1.69
ATF4P18848 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATF4P18848 AL110118.1-201ENST00000553543 400 ntBASIC4.5□□□□□ -1.69
ATF4P18848 RPA2P1-201ENST00000556557 721 ntBASIC4.5□□□□□ -1.69
ATF4P18848 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.5□□□□□ -1.69
ATF4P18848 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATF4P18848 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.5□□□□□ -1.69
ATF4P18848 AP000787.2-201ENST00000604432 568 ntBASIC4.5□□□□□ -1.69
ATF4P18848 AL157817.1-201ENST00000614264 790 ntBASIC4.5□□□□□ -1.69
ATF4P18848 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.5□□□□□ -1.69
ATF4P18848 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.5□□□□□ -1.69
ATF4P18848 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.5□□□□□ -1.69
ATF4P18848 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATF4P18848 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ATF4P18848 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.5□□□□□ -1.69
ATF4P18848 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.5□□□□□ -1.69
ATF4P18848 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.5□□□□□ -1.69
ATF4P18848 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.5□□□□□ -1.69
ATF4P18848 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.49□□□□□ -1.69
ATF4P18848 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
ATF4P18848 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.49□□□□□ -1.69
ATF4P18848 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATF4P18848 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
ATF4P18848 SNORD3E-201ENST00000362899 217 ntBASIC4.49□□□□□ -1.69
ATF4P18848 RNU6-1188P-201ENST00000363795 107 ntBASIC4.49□□□□□ -1.69
ATF4P18848 Y_RNA.187-201ENST00000363918 113 ntBASIC4.49□□□□□ -1.69
ATF4P18848 Y_RNA.394-201ENST00000383942 103 ntBASIC4.49□□□□□ -1.69
ATF4P18848 SNORA75B-201ENST00000384053 137 ntBASIC4.49□□□□□ -1.69
ATF4P18848 RNA5SP122-201ENST00000384457 108 ntBASIC4.49□□□□□ -1.69
ATF4P18848 SNORA40C-201ENST00000391285 128 ntBASIC4.49□□□□□ -1.69
ATF4P18848 RNU4-25P-201ENST00000410569 230 ntBASIC4.49□□□□□ -1.69
ATF4P18848 RN7SKP53-201ENST00000411337 315 ntBASIC4.49□□□□□ -1.69
ATF4P18848 RPS20P14-201ENST00000412545 360 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AL592148.1-201ENST00000413568 445 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.49□□□□□ -1.69
ATF4P18848 AL353729.1-201ENST00000425044 720 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.49□□□□□ -1.69
ATF4P18848 RPS29P14-201ENST00000431518 171 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.49□□□□□ -1.69
ATF4P18848 AL078601.1-201ENST00000444542 271 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AL118496.2-201ENST00000448300 230 ntBASIC4.49□□□□□ -1.69
ATF4P18848 OR1H1P-201ENST00000448731 937 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.49□□□□□ -1.69
ATF4P18848 HMGN2P16-201ENST00000456802 261 ntBASIC4.49□□□□□ -1.69
ATF4P18848 RPL30P15-201ENST00000457129 321 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AC006539.1-201ENST00000481419 501 ntBASIC4.49□□□□□ -1.69
ATF4P18848 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
ATF4P18848 SCARNA18.1-201ENST00000516330 83 ntBASIC4.49□□□□□ -1.69
ATF4P18848 IGKV3D-25-201ENST00000519599 235 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AP000620.1-201ENST00000527147 504 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.49□□□□□ -1.69
ATF4P18848 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.49□□□□□ -1.69
ATF4P18848 AL163153.1-201ENST00000554223 283 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.49□□□□□ -1.69
ATF4P18848 AL355598.1-201ENST00000604169 202 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AL627309.6-201ENST00000606857 840 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AL139099.4-201ENST00000614802 114 ntBASIC4.49□□□□□ -1.69
ATF4P18848 uc_338.18-201ENST00000615451 175 ntBASIC4.49□□□□□ -1.69
ATF4P18848 MIR8069-1-201ENST00000616627 86 ntBASIC4.49□□□□□ -1.69
ATF4P18848 MIR8069-2-201ENST00000621412 86 ntBASIC4.49□□□□□ -1.69
ATF4P18848 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AC134503.1-201ENST00000633048 54 ntBASIC4.49□□□□□ -1.69
ATF4P18848 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.49□□□□□ -1.69
ATF4P18848 U6.99-201ENST00000637524 83 ntBASIC4.49□□□□□ -1.69
ATF4P18848 MIR4302-201ENST00000638058 60 ntBASIC4.49□□□□□ -1.69
ATF4P18848 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.49□□□□□ -1.69
ATF4P18848 MTND4P27-201ENST00000450813 1354 ntBASIC4.49□□□□□ -1.69
ATF4P18848 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATF4P18848 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ATF4P18848 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
ATF4P18848 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.48□□□□□ -1.69
ATF4P18848 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATF4P18848 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
ATF4P18848 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATF4P18848 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
ATF4P18848 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
ATF4P18848 SNORD14B-201ENST00000364533 90 ntBASIC4.48□□□□□ -1.69
ATF4P18848 RNU6-217P-201ENST00000384164 104 ntBASIC4.48□□□□□ -1.69
ATF4P18848 MIR10A-201ENST00000385043 110 ntBASIC4.48□□□□□ -1.69
ATF4P18848 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATF4P18848 AL445529.1-201ENST00000398713 389 ntBASIC4.48□□□□□ -1.69
ATF4P18848 RNA5SP146-201ENST00000410743 123 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms