Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.51□□□□□ -2.17
HMGA1P17096 AL161912.3-201ENST00000605404 628 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.51□□□□□ -2.17
HMGA1P17096 AL356118.1-201ENST00000635272 1078 ntBASIC1.51□□□□□ -2.17
HMGA1P17096 MTCO1P4-201ENST00000520516 1409 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 RNA5SP139-201ENST00000364340 117 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 U3.40-201ENST00000408706 208 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 RNU4-65P-201ENST00000410473 140 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 PAICSP7-201ENST00000419829 962 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 AC007098.1-201ENST00000420122 367 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGA1P17096 AC009237.2-201ENST00000421358 284 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGA1P17096 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGA1P17096 AC092473.1-201ENST00000441098 221 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMGA1P17096 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGA1P17096 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.5□□□□□ -2.17
HMGA1P17096 RN7SKP234-201ENST00000517173 224 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGA1P17096 MTCYBP41-201ENST00000528913 1123 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 AC139103.1-201ENST00000534696 1030 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 AC008083.2-201ENST00000546707 476 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.5□□□□□ -2.17
HMGA1P17096 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.5□□□□□ -2.17
HMGA1P17096 MIR3122-201ENST00000577243 73 ntBASIC1.5□□□□□ -2.17
HMGA1P17096 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.5□□□□□ -2.17
HMGA1P17096 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HMGA1P17096 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.5□□□□□ -2.17
HMGA1P17096 AC110792.3-201ENST00000595906 1614 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 AL391987.6-201ENST00000305671 199 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
HMGA1P17096 RNU6-50P-201ENST00000362356 103 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 U8.1-201ENST00000362843 134 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 RNA5SP363-201ENST00000365072 115 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 AP002784.2-201ENST00000397300 549 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 AL030996.1-201ENST00000411430 235 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 AL445183.3-201ENST00000414168 502 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 Z85995.1-201ENST00000415547 335 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 AL512661.1-201ENST00000434586 1253 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 OR10R1P-201ENST00000441524 1141 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.49□□□□□ -2.17
HMGA1P17096 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 RPS15AP34-201ENST00000487776 387 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 RNU6-1073P-201ENST00000517182 106 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.49□□□□□ -2.17
HMGA1P17096 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGA1P17096 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.49□□□□□ -2.17
HMGA1P17096 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.49□□□□□ -2.17
HMGA1P17096 SNRPGP15-201ENST00000600149 222 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
HMGA1P17096 NUP58P1-201ENST00000502546 1738 ntBASIC1.49□□□□□ -2.17
HMGA1P17096 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HMGA1P17096 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
HMGA1P17096 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
HMGA1P17096 AC234782.4-201ENST00000417646 1048 ntBASIC1.48□□□□□ -2.17
HMGA1P17096 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.48□□□□□ -2.17
HMGA1P17096 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGA1P17096 CKS1BP5-201ENST00000434172 273 ntBASIC1.48□□□□□ -2.17
HMGA1P17096 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.48□□□□□ -2.17
HMGA1P17096 SDCBPP1-201ENST00000440192 890 ntBASIC1.48□□□□□ -2.17
HMGA1P17096 SNORD121B-201ENST00000458838 81 ntBASIC1.48□□□□□ -2.17
HMGA1P17096 AC008427.1-201ENST00000503102 655 ntBASIC1.48□□□□□ -2.17
HMGA1P17096 AC114322.1-201ENST00000506771 926 ntBASIC1.48□□□□□ -2.17
HMGA1P17096 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGA1P17096 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGA1P17096 RNU1-92P-201ENST00000517017 135 ntBASIC1.48□□□□□ -2.17
HMGA1P17096 AC245036.5-201ENST00000596330 847 ntBASIC1.48□□□□□ -2.17
HMGA1P17096 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
HMGA1P17096 uc_338.9-201ENST00000617424 182 ntBASIC1.48□□□□□ -2.17
HMGA1P17096 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
HMGA1P17096 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
HMGA1P17096 AC007342.9-201ENST00000623877 1385 ntBASIC1.47□□□□□ -2.17
HMGA1P17096 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.47□□□□□ -2.17
HMGA1P17096 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
HMGA1P17096 RNY1P10-201ENST00000363268 113 ntBASIC1.47□□□□□ -2.17
HMGA1P17096 Y_RNA.327-201ENST00000365201 102 ntBASIC1.47□□□□□ -2.17
HMGA1P17096 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.47□□□□□ -2.17
HMGA1P17096 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.47□□□□□ -2.17
HMGA1P17096 AC090515.1-201ENST00000465295 476 ntBASIC1.47□□□□□ -2.17
HMGA1P17096 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.47□□□□□ -2.17
HMGA1P17096 AC022493.1-201ENST00000492984 337 ntBASIC1.47□□□□□ -2.17
HMGA1P17096 AP004607.1-201ENST00000524456 203 ntBASIC1.47□□□□□ -2.17
HMGA1P17096 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.47□□□□□ -2.17
HMGA1P17096 AC009220.3-201ENST00000604318 586 ntBASIC1.47□□□□□ -2.17
HMGA1P17096 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.47□□□□□ -2.17
HMGA1P17096 AC106791.2-201ENST00000604680 391 ntBASIC1.47□□□□□ -2.17
HMGA1P17096 AC012360.2-201ENST00000609349 391 ntBASIC1.47□□□□□ -2.17
HMGA1P17096 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMGA1P17096 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMGA1P17096 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
HMGA1P17096 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HMGA1P17096 RNU6-392P-201ENST00000364926 101 ntBASIC1.46□□□□□ -2.18
HMGA1P17096 AL035405.1-201ENST00000400795 710 ntBASIC1.46□□□□□ -2.18
HMGA1P17096 AC096533.1-201ENST00000411645 353 ntBASIC1.46□□□□□ -2.18
HMGA1P17096 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.46□□□□□ -2.18
HMGA1P17096 AC096632.1-201ENST00000427395 310 ntBASIC1.46□□□□□ -2.18
HMGA1P17096 COX6CP12-201ENST00000446748 202 ntBASIC1.46□□□□□ -2.18
HMGA1P17096 Z73417.1-201ENST00000447373 778 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms