Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RN7SKP57-201ENST00000517248 293 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.34□□□□□ -1.87
PDGFRAP16234 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.34□□□□□ -1.87
PDGFRAP16234 AC037471.2-201ENST00000564941 598 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 AC002400.1-201ENST00000569310 726 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 MTATP6P24-201ENST00000576835 677 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 ISCA1P3-201ENST00000577104 373 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 AP000254.1-201ENST00000609934 520 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 AL591516.1-201ENST00000611326 274 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.34□□□□□ -1.87
PDGFRAP16234 AC079597.1-201ENST00000624306 508 ntBASIC3.34□□□□□ -1.87
PDGFRAP16234 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PDGFRAP16234 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
PDGFRAP16234 AC104454.1-201ENST00000421341 1401 ntBASIC3.34□□□□□ -1.88
PDGFRAP16234 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PDGFRAP16234 RNU6-253P-201ENST00000384730 105 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 RNU6-754P-201ENST00000391166 107 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 AC098592.1-201ENST00000419352 333 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 AL445669.1-201ENST00000426743 755 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 MTND1P20-201ENST00000430341 950 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 AL353705.1-201ENST00000433468 480 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.33□□□□□ -1.88
PDGFRAP16234 AC104472.2-201ENST00000469035 601 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 AC068724.1-201ENST00000487100 792 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.33□□□□□ -1.88
PDGFRAP16234 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.33□□□□□ -1.88
PDGFRAP16234 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.33□□□□□ -1.88
PDGFRAP16234 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 ELOCP32-201ENST00000548625 324 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 MIR3200-201ENST00000580767 85 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.33□□□□□ -1.88
PDGFRAP16234 VN1R90P-201ENST00000595717 726 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 AC018714.1-201ENST00000605028 208 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 YPEL5P2-201ENST00000605553 359 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 MIR6076-201ENST00000617521 113 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 AP000676.4-201ENST00000624659 623 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 AL159972.1-201ENST00000625150 448 ntBASIC3.33□□□□□ -1.88
PDGFRAP16234 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PDGFRAP16234 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.33□□□□□ -1.88
PDGFRAP16234 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDGFRAP16234 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.33□□□□□ -1.88
PDGFRAP16234 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PDGFRAP16234 SDAD1P2-201ENST00000441308 2028 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFRAP16234 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFRAP16234 OR1S2-201ENST00000302592 978 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 Y_RNA.18-201ENST00000362461 102 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 RNU5A-1-201ENST00000362698 116 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 U3.11-201ENST00000364476 212 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 Y_RNA.302-201ENST00000364997 102 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 SNORA36C-201ENST00000384289 132 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 FAT1P1-201ENST00000406588 507 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
PDGFRAP16234 RPL32P35-201ENST00000415214 394 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.32□□□□□ -1.88
PDGFRAP16234 NDUFB4P6-201ENST00000436819 366 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 AL049714.1-201ENST00000466686 347 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 RPS26P21-201ENST00000475397 348 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 RPL31P60-201ENST00000478450 367 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.32□□□□□ -1.88
PDGFRAP16234 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.32□□□□□ -1.88
PDGFRAP16234 LTV1P1-201ENST00000510683 1237 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.32□□□□□ -1.88
PDGFRAP16234 SNORA31.1-201ENST00000515993 133 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 SNORA31.5-201ENST00000516190 133 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 RN7SKP282-201ENST00000516824 299 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.32□□□□□ -1.88
PDGFRAP16234 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.32□□□□□ -1.88
PDGFRAP16234 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.32□□□□□ -1.88
PDGFRAP16234 MIR544B-201ENST00000582372 78 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 UBE2L4-201ENST00000587688 464 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 AP000811.1-201ENST00000603803 651 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 AC068313.1-201ENST00000604028 1008 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 AL031667.3-201ENST00000620124 655 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 AL158801.5-201ENST00000623123 465 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFRAP16234 AC011460.1-201ENST00000636268 1834 ntBASIC3.32□□□□□ -1.88
PDGFRAP16234 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PDGFRAP16234 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
PDGFRAP16234 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDGFRAP16234 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PDGFRAP16234 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
PDGFRAP16234 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.31□□□□□ -1.88
PDGFRAP16234 AC012321.1-201ENST00000561622 1588 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.31□□□□□ -1.88
PDGFRAP16234 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 SNORA1.3-201ENST00000384676 136 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PDGFRAP16234 RNU6-516P-201ENST00000411381 104 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.31□□□□□ -1.88
PDGFRAP16234 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.31□□□□□ -1.88
PDGFRAP16234 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.31□□□□□ -1.88
PDGFRAP16234 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
PDGFRAP16234 AL353678.1-201ENST00000422735 741 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 TMEM167AP1-201ENST00000423409 219 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 USP9YP36-201ENST00000424581 829 ntBASIC3.31□□□□□ -1.88
PDGFRAP16234 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.31□□□□□ -1.88
PDGFRAP16234 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms