Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC231657.1-201ENST00000624313 397 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AL356473.1-201ENST00000406203 1408 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 RNU4-68P-201ENST00000364314 141 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 RNU1-101P-201ENST00000391171 127 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AL139095.1-201ENST00000404326 391 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 Z92545.1-201ENST00000411782 234 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 MTCO2P5-201ENST00000422621 426 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 BX119904.4-201ENST00000424402 301 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 NANOGP5-201ENST00000424456 877 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC092648.1-201ENST00000425870 423 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 MTND4P6-201ENST00000438297 472 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC004854.1-201ENST00000440356 349 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC112653.1-201ENST00000443851 386 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC002381.1-201ENST00000447049 280 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 MTND1P16-201ENST00000465177 898 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 RPL31P60-201ENST00000478450 367 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 HMGB1P36-201ENST00000487709 576 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC079395.1-201ENST00000510981 262 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 SNORD59.2-201ENST00000516873 68 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 OR4K7P-201ENST00000580232 945 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 MIR5092-201ENST00000583139 88 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 BNIP3P39-201ENST00000601077 554 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC006270.3-201ENST00000605967 1036 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AL445264.1-201ENST00000621719 171 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC103798.2-201ENST00000624292 632 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 CRYM-AS1-204ENST00000637983 556 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AL079343.1-201ENST00000572358 1771 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
HLA-DPB1P04440 AC011460.1-201ENST00000636268 1834 ntBASIC2.38□□□□□ -2.03
HLA-DPB1P04440 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC012321.1-201ENST00000561622 1588 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 RNU6-925P-201ENST00000384629 104 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC087499.2-201ENST00000432861 149 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 RPS25P9-201ENST00000435591 252 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 SNRPEP4-201ENST00000435815 279 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 MTCO2P20-201ENST00000437339 673 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 MTND5P14-201ENST00000441481 1267 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 RPL21P134-201ENST00000453468 483 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 RPL30P9-201ENST00000465586 330 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC006483.1-201ENST00000487308 313 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC116353.3-201ENST00000511215 249 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 RNU6-528P-201ENST00000516926 100 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 SNORA31.22-201ENST00000517204 135 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AP001804.3-201ENST00000525146 880 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 OR5BN1P-201ENST00000532955 829 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC125611.2-201ENST00000551907 647 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC090615.1-201ENST00000577519 154 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC105224.1-201ENST00000587055 421 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 HSPE1P7-201ENST00000604681 321 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC106052.1-201ENST00000608029 497 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AP000254.1-201ENST00000609934 520 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AL357080.1-201ENST00000617394 239 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC006386.1-201ENST00000619436 415 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC006386.2-201ENST00000624491 75 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 AC012005.1-201ENST00000624575 75 ntBASIC2.37□□□□□ -2.03
HLA-DPB1P04440 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
HLA-DPB1P04440 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HLA-DPB1P04440 RNU6-777P-201ENST00000364265 104 ntBASIC2.36□□□□□ -2.03
HLA-DPB1P04440 Y_RNA.311-201ENST00000365068 96 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms