Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MTCO1P27-201ENST00000448269 226 ntBASIC3.31□□□□□ -1.88
VTNP04004 RPL37P4-201ENST00000448908 268 ntBASIC3.31□□□□□ -1.88
VTNP04004 AC009961.3-201ENST00000449832 765 ntBASIC3.31□□□□□ -1.88
VTNP04004 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.31□□□□□ -1.88
VTNP04004 SUMO2P2-201ENST00000456482 255 ntBASIC3.31□□□□□ -1.88
VTNP04004 RPL23AP14-201ENST00000468281 468 ntBASIC3.31□□□□□ -1.88
VTNP04004 HMGB1P36-201ENST00000487709 576 ntBASIC3.31□□□□□ -1.88
VTNP04004 RN7SL20P-201ENST00000488827 297 ntBASIC3.31□□□□□ -1.88
VTNP04004 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.31□□□□□ -1.88
VTNP04004 AC024589.1-201ENST00000512207 263 ntBASIC3.31□□□□□ -1.88
VTNP04004 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.31□□□□□ -1.88
VTNP04004 RNU6-1073P-201ENST00000517182 106 ntBASIC3.31□□□□□ -1.88
VTNP04004 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.31□□□□□ -1.88
VTNP04004 AC104027.1-201ENST00000521887 300 ntBASIC3.31□□□□□ -1.88
VTNP04004 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.31□□□□□ -1.88
VTNP04004 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.31□□□□□ -1.88
VTNP04004 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.31□□□□□ -1.88
VTNP04004 U73023.1-201ENST00000603134 700 ntBASIC3.31□□□□□ -1.88
VTNP04004 AC090186.1-201ENST00000605991 572 ntBASIC3.31□□□□□ -1.88
VTNP04004 AC018755.4-201ENST00000619715 454 ntBASIC3.31□□□□□ -1.88
VTNP04004 AC007318.2-201ENST00000620999 243 ntBASIC3.31□□□□□ -1.88
VTNP04004 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VTNP04004 AP003399.1-201ENST00000637534 361 ntBASIC3.31□□□□□ -1.88
VTNP04004 AC006927.3-201ENST00000638789 384 ntBASIC3.31□□□□□ -1.88
VTNP04004 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
VTNP04004 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VTNP04004 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
VTNP04004 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VTNP04004 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.31□□□□□ -1.88
VTNP04004 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
VTNP04004 PABPC1P9-201ENST00000426076 1612 ntBASIC3.3□□□□□ -1.88
VTNP04004 AC097714.1-201ENST00000511272 1647 ntBASIC3.3□□□□□ -1.88
VTNP04004 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.3□□□□□ -1.88
VTNP04004 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VTNP04004 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
VTNP04004 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VTNP04004 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
VTNP04004 AC118273.1-201ENST00000525324 3006 ntBASIC3.3□□□□□ -1.88
VTNP04004 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VTNP04004 RNU1-75P-201ENST00000347264 129 ntBASIC3.3□□□□□ -1.88
VTNP04004 Y_RNA.510-201ENST00000384511 114 ntBASIC3.3□□□□□ -1.88
VTNP04004 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VTNP04004 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
VTNP04004 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.3□□□□□ -1.88
VTNP04004 RNA5SP107-201ENST00000411358 122 ntBASIC3.3□□□□□ -1.88
VTNP04004 MTCO3P12-201ENST00000416718 547 ntBASIC3.3□□□□□ -1.88
VTNP04004 NPM1P11-201ENST00000417106 855 ntBASIC3.3□□□□□ -1.88
VTNP04004 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.3□□□□□ -1.88
VTNP04004 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
VTNP04004 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.3□□□□□ -1.88
VTNP04004 RPL21P66-201ENST00000426566 466 ntBASIC3.3□□□□□ -1.88
VTNP04004 VDAC1P3-201ENST00000434069 851 ntBASIC3.3□□□□□ -1.88
VTNP04004 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.3□□□□□ -1.88
VTNP04004 AL512286.1-201ENST00000439244 400 ntBASIC3.3□□□□□ -1.88
VTNP04004 TXNP1-201ENST00000441872 371 ntBASIC3.3□□□□□ -1.88
VTNP04004 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.3□□□□□ -1.88
VTNP04004 RPS24P6-201ENST00000452670 400 ntBASIC3.3□□□□□ -1.88
VTNP04004 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.3□□□□□ -1.88
VTNP04004 AC010285.1-201ENST00000470580 392 ntBASIC3.3□□□□□ -1.88
VTNP04004 SETP11-201ENST00000473027 690 ntBASIC3.3□□□□□ -1.88
VTNP04004 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.3□□□□□ -1.88
VTNP04004 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.3□□□□□ -1.88
VTNP04004 OR5BM1P-201ENST00000512021 366 ntBASIC3.3□□□□□ -1.88
VTNP04004 AF131216.2-201ENST00000512316 564 ntBASIC3.3□□□□□ -1.88
VTNP04004 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.3□□□□□ -1.88
VTNP04004 AC026801.2-201ENST00000515352 425 ntBASIC3.3□□□□□ -1.88
VTNP04004 RNA5SP217-201ENST00000515959 91 ntBASIC3.3□□□□□ -1.88
VTNP04004 SNORA31.20-201ENST00000517111 133 ntBASIC3.3□□□□□ -1.88
VTNP04004 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.3□□□□□ -1.88
VTNP04004 COX6CP8-201ENST00000522620 226 ntBASIC3.3□□□□□ -1.88
VTNP04004 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.3□□□□□ -1.88
VTNP04004 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VTNP04004 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.3□□□□□ -1.88
VTNP04004 ACTR3BP3-201ENST00000565577 979 ntBASIC3.3□□□□□ -1.88
VTNP04004 MIR3690-201ENST00000580266 75 ntBASIC3.3□□□□□ -1.88
VTNP04004 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.3□□□□□ -1.88
VTNP04004 AP001004.1-201ENST00000582468 324 ntBASIC3.3□□□□□ -1.88
VTNP04004 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.3□□□□□ -1.88
VTNP04004 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.3□□□□□ -1.88
VTNP04004 AC128687.1-201ENST00000605304 619 ntBASIC3.3□□□□□ -1.88
VTNP04004 AC080013.6-201ENST00000606185 215 ntBASIC3.3□□□□□ -1.88
VTNP04004 AL031775.1-201ENST00000607014 887 ntBASIC3.3□□□□□ -1.88
VTNP04004 AC006023.2-201ENST00000609916 167 ntBASIC3.3□□□□□ -1.88
VTNP04004 AL590282.1-201ENST00000610379 1136 ntBASIC3.3□□□□□ -1.88
VTNP04004 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
VTNP04004 AC092628.2-201ENST00000622492 339 ntBASIC3.3□□□□□ -1.88
VTNP04004 Z69908.1-201ENST00000622603 247 ntBASIC3.3□□□□□ -1.88
VTNP04004 AC091965.5-201ENST00000624785 342 ntBASIC3.3□□□□□ -1.88
VTNP04004 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.3□□□□□ -1.88
VTNP04004 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.3□□□□□ -1.88
VTNP04004 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
VTNP04004 AC004925.1-201ENST00000624256 2706 ntBASIC3.3□□□□□ -1.88
VTNP04004 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VTNP04004 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
VTNP04004 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VTNP04004 AC244517.1-201ENST00000606030 2086 ntBASIC3.29□□□□□ -1.88
VTNP04004 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.29□□□□□ -1.88
VTNP04004 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VTNP04004 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VTNP04004 SNORA5B-201ENST00000363786 132 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms