Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RPL30P5-201ENST00000494923 336 ntBASIC3.25□□□□□ -1.89
SIX3O95343 AC135721.1-201ENST00000497954 479 ntBASIC3.25□□□□□ -1.89
SIX3O95343 AC118282.1-201ENST00000506408 765 ntBASIC3.25□□□□□ -1.89
SIX3O95343 FCF1P8-201ENST00000510322 597 ntBASIC3.25□□□□□ -1.89
SIX3O95343 RNA5SP291-201ENST00000517222 105 ntBASIC3.25□□□□□ -1.89
SIX3O95343 SCARNA20.6-201ENST00000517251 106 ntBASIC3.25□□□□□ -1.89
SIX3O95343 AC136618.2-201ENST00000575091 400 ntBASIC3.25□□□□□ -1.89
SIX3O95343 MIR3186-201ENST00000577404 85 ntBASIC3.25□□□□□ -1.89
SIX3O95343 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX3O95343 MIR3609-201ENST00000582661 80 ntBASIC3.25□□□□□ -1.89
SIX3O95343 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.25□□□□□ -1.89
SIX3O95343 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX3O95343 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.25□□□□□ -1.89
SIX3O95343 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX3O95343 U3.45-201ENST00000607547 219 ntBASIC3.25□□□□□ -1.89
SIX3O95343 AC087683.2-201ENST00000611384 326 ntBASIC3.25□□□□□ -1.89
SIX3O95343 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.25□□□□□ -1.89
SIX3O95343 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.25□□□□□ -1.89
SIX3O95343 AC092628.2-201ENST00000622492 339 ntBASIC3.25□□□□□ -1.89
SIX3O95343 AC118273.1-201ENST00000525324 3006 ntBASIC3.25□□□□□ -1.89
SIX3O95343 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SIX3O95343 AL138713.1-201ENST00000624026 2130 ntBASIC3.25□□□□□ -1.89
SIX3O95343 AL356274.2-201ENST00000624379 3752 ntBASIC3.25□□□□□ -1.89
SIX3O95343 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIX3O95343 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SIX3O95343 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX3O95343 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX3O95343 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX3O95343 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.24□□□□□ -1.89
SIX3O95343 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.24□□□□□ -1.89
SIX3O95343 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SIX3O95343 SNORD113-6-201ENST00000363345 75 ntBASIC3.24□□□□□ -1.89
SIX3O95343 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SIX3O95343 MIR325-201ENST00000385260 98 ntBASIC3.24□□□□□ -1.89
SIX3O95343 AC119751.3-201ENST00000399720 670 ntBASIC3.24□□□□□ -1.89
SIX3O95343 RN7SKP111-201ENST00000410349 271 ntBASIC3.24□□□□□ -1.89
SIX3O95343 AL390023.1-201ENST00000428836 262 ntBASIC3.24□□□□□ -1.89
SIX3O95343 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.24□□□□□ -1.89
SIX3O95343 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.24□□□□□ -1.89
SIX3O95343 MTCYBP39-201ENST00000437562 491 ntBASIC3.24□□□□□ -1.89
SIX3O95343 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.24□□□□□ -1.89
SIX3O95343 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.24□□□□□ -1.89
SIX3O95343 RPS20P20-201ENST00000460498 340 ntBASIC3.24□□□□□ -1.89
SIX3O95343 AC104472.2-201ENST00000469035 601 ntBASIC3.24□□□□□ -1.89
SIX3O95343 RPS15AP36-201ENST00000492022 382 ntBASIC3.24□□□□□ -1.89
SIX3O95343 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SIX3O95343 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.24□□□□□ -1.89
SIX3O95343 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX3O95343 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.24□□□□□ -1.89
SIX3O95343 OR5BM1P-201ENST00000512021 366 ntBASIC3.24□□□□□ -1.89
SIX3O95343 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SIX3O95343 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SIX3O95343 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.24□□□□□ -1.89
SIX3O95343 Y_RNA.673-201ENST00000516306 88 ntBASIC3.24□□□□□ -1.89
SIX3O95343 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
SIX3O95343 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.24□□□□□ -1.89
SIX3O95343 AP000907.2-201ENST00000530827 353 ntBASIC3.24□□□□□ -1.89
SIX3O95343 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIX3O95343 OR7K1P-201ENST00000546439 926 ntBASIC3.24□□□□□ -1.89
SIX3O95343 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.24□□□□□ -1.89
SIX3O95343 ISCA1P3-201ENST00000577104 373 ntBASIC3.24□□□□□ -1.89
SIX3O95343 AC015917.1-201ENST00000579654 510 ntBASIC3.24□□□□□ -1.89
SIX3O95343 AC002545.1-201ENST00000592511 181 ntBASIC3.24□□□□□ -1.89
SIX3O95343 AC068790.3-201ENST00000602988 553 ntBASIC3.24□□□□□ -1.89
SIX3O95343 AC091965.4-201ENST00000607691 587 ntBASIC3.24□□□□□ -1.89
SIX3O95343 AC004908.2-201ENST00000609090 574 ntBASIC3.24□□□□□ -1.89
SIX3O95343 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SIX3O95343 AC079395.3-201ENST00000615161 484 ntBASIC3.24□□□□□ -1.89
SIX3O95343 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX3O95343 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.24□□□□□ -1.89
SIX3O95343 OR5H6-203ENST00000642105 978 ntBASIC3.24□□□□□ -1.89
SIX3O95343 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SIX3O95343 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIX3O95343 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIX3O95343 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIX3O95343 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIX3O95343 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIX3O95343 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SIX3O95343 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SIX3O95343 SNORD56.3-201ENST00000363507 71 ntBASIC3.23□□□□□ -1.89
SIX3O95343 RNA5SP126-201ENST00000365092 109 ntBASIC3.23□□□□□ -1.89
SIX3O95343 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.23□□□□□ -1.89
SIX3O95343 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
SIX3O95343 RNU1-39P-201ENST00000383897 165 ntBASIC3.23□□□□□ -1.89
SIX3O95343 SNORA36C-201ENST00000384289 132 ntBASIC3.23□□□□□ -1.89
SIX3O95343 TAS2R15P-201ENST00000390674 928 ntBASIC3.23□□□□□ -1.89
SIX3O95343 RNU6-278P-201ENST00000390945 109 ntBASIC3.23□□□□□ -1.89
SIX3O95343 RNU6-754P-201ENST00000391166 107 ntBASIC3.23□□□□□ -1.89
SIX3O95343 RPS29P4-201ENST00000414733 161 ntBASIC3.23□□□□□ -1.89
SIX3O95343 MRPL50P2-201ENST00000416821 482 ntBASIC3.23□□□□□ -1.89
SIX3O95343 BX890604.2-201ENST00000427883 474 ntBASIC3.23□□□□□ -1.89
SIX3O95343 RPL21P40-201ENST00000428586 483 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AC007919.1-201ENST00000429380 217 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AL512844.2-201ENST00000433990 593 ntBASIC3.23□□□□□ -1.89
SIX3O95343 RSU1P2-202ENST00000437884 485 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.23□□□□□ -1.89
SIX3O95343 AL162389.1-201ENST00000449233 177 ntBASIC3.23□□□□□ -1.89
SIX3O95343 SNRPGP6-201ENST00000451124 220 ntBASIC3.23□□□□□ -1.89
SIX3O95343 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.23□□□□□ -1.89
SIX3O95343 BX510359.1-201ENST00000456973 237 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms