Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 PARP4P3-201ENST00000510265 317 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 RNA5SP315-201ENST00000516340 116 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 RNA5SP312-201ENST00000517068 116 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 AP003730.1-201ENST00000524605 285 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 RANP3-201ENST00000530970 276 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCD1O75127 AC106782.4-201ENST00000568264 210 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 MYL12BP1-201ENST00000569826 507 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 MIR3672-201ENST00000584290 82 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCD1O75127 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 AC022418.1-201ENST00000624118 445 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 Z69720.2-201ENST00000624755 279 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.82□□□□□ -1.48
PTCD1O75127 AC027287.1-201ENST00000553115 1453 ntBASIC5.82□□□□□ -1.48
PTCD1O75127 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCD1O75127 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCD1O75127 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCD1O75127 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PTCD1O75127 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PTCD1O75127 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCD1O75127 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PTCD1O75127 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCD1O75127 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCD1O75127 AC104118.1-201ENST00000607625 1589 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCD1O75127 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCD1O75127 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
PTCD1O75127 SET-203ENST00000372688 801 ntTSL 2 BASIC5.81□□□□□ -1.48
PTCD1O75127 DEFB109C-201ENST00000382575 264 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 DEFB109B-201ENST00000382656 264 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 RNU4-65P-201ENST00000410473 140 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 RNU6-387P-201ENST00000411331 105 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCD1O75127 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCD1O75127 AC092447.6-201ENST00000414578 210 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCD1O75127 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.81□□□□□ -1.48
PTCD1O75127 RAC1P6-201ENST00000423911 575 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCD1O75127 FABP5P14-201ENST00000437273 393 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCD1O75127 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCD1O75127 EIF4A1P11-201ENST00000451239 222 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCD1O75127 RBBP4P6-201ENST00000508098 202 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 RNU6-189P-201ENST00000516120 101 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 TRAV8-5-201ENST00000537369 341 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 MIR4512-201ENST00000583257 77 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 MIR5690-201ENST00000583739 73 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.81□□□□□ -1.48
PTCD1O75127 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCD1O75127 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCD1O75127 RNF138P2-201ENST00000603490 592 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 AL591034.3-201ENST00000605511 685 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 MIR4496-201ENST00000635896 61 ntBASIC5.81□□□□□ -1.48
PTCD1O75127 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.81□□□□□ -1.48
PTCD1O75127 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PTCD1O75127 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PTCD1O75127 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PTCD1O75127 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
PTCD1O75127 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD1O75127 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD1O75127 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD1O75127 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD1O75127 MIR331-201ENST00000362302 94 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 RNU6-1284P-201ENST00000363701 100 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 RNU1-64P-201ENST00000365443 163 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 RNA5SP219-201ENST00000390940 113 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 RNU6-821P-201ENST00000390995 107 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 AL139095.3-201ENST00000419672 1203 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCD1O75127 HMGB3P22-202ENST00000451823 572 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 FABP5P13-201ENST00000452144 328 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 RPL37P6-202ENST00000464216 403 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCD1O75127 RPL21P93-201ENST00000480465 489 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
PTCD1O75127 MIR2116-201ENST00000517221 80 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 RN7SKP295-201ENST00000517264 153 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC5.8□□□□□ -1.48
PTCD1O75127 IMMP1LP2-201ENST00000552954 492 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 OR11H5P-201ENST00000554039 926 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCD1O75127 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.8□□□□□ -1.48
PTCD1O75127 AC005357.1-201ENST00000588399 301 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 AC008162.1-201ENST00000604718 254 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 AL670379.4-201ENST00000605279 254 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCD1O75127 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.8□□□□□ -1.48
PTCD1O75127 AC005005.4-201ENST00000623789 16698 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD1O75127 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD1O75127 AC104623.2-202ENST00000623477 4002 ntBASIC5.8□□□□□ -1.48
PTCD1O75127 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PTCD1O75127 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.8□□□□□ -1.48
PTCD1O75127 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PTCD1O75127 AC015813.6-201ENST00000624409 5808 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms