Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 MTND5P3-201ENST00000438536 1800 ntBASIC3.28□□□□□ -1.88
PRKNO60260 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
PRKNO60260 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PRKNO60260 RNU6-283P-201ENST00000364788 107 ntBASIC3.28□□□□□ -1.88
PRKNO60260 Y_RNA.296-201ENST00000364930 108 ntBASIC3.28□□□□□ -1.88
PRKNO60260 RN7SKP53-201ENST00000411337 315 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AC019097.1-201ENST00000424783 735 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.28□□□□□ -1.88
PRKNO60260 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.28□□□□□ -1.88
PRKNO60260 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.28□□□□□ -1.88
PRKNO60260 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.28□□□□□ -1.88
PRKNO60260 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.28□□□□□ -1.88
PRKNO60260 DNAJC19P4-201ENST00000440115 345 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PRKNO60260 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AC093899.1-201ENST00000457984 376 ntBASIC3.28□□□□□ -1.88
PRKNO60260 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.28□□□□□ -1.88
PRKNO60260 RPS3AP50-201ENST00000487064 803 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.28□□□□□ -1.88
PRKNO60260 AC055855.1-201ENST00000489563 579 ntBASIC3.28□□□□□ -1.88
PRKNO60260 RPL9P6-201ENST00000492764 598 ntBASIC3.28□□□□□ -1.88
PRKNO60260 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.28□□□□□ -1.88
PRKNO60260 RNU6-506P-201ENST00000516553 94 ntBASIC3.28□□□□□ -1.88
PRKNO60260 IGKV2D-23-201ENST00000518179 286 ntBASIC3.28□□□□□ -1.88
PRKNO60260 OR4R3P-201ENST00000525084 838 ntBASIC3.28□□□□□ -1.88
PRKNO60260 OR5G4P-201ENST00000525251 760 ntBASIC3.28□□□□□ -1.88
PRKNO60260 DEFB108A-201ENST00000530110 222 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.28□□□□□ -1.88
PRKNO60260 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.28□□□□□ -1.88
PRKNO60260 AL121576.1-201ENST00000556055 276 ntBASIC3.28□□□□□ -1.88
PRKNO60260 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.28□□□□□ -1.88
PRKNO60260 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.28□□□□□ -1.88
PRKNO60260 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.28□□□□□ -1.88
PRKNO60260 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.28□□□□□ -1.88
PRKNO60260 MTATP6P3-201ENST00000581686 676 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.28□□□□□ -1.88
PRKNO60260 AC068790.3-201ENST00000602988 553 ntBASIC3.28□□□□□ -1.88
PRKNO60260 DUXAP4-201ENST00000603046 613 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AC126118.1-201ENST00000607744 628 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AC069200.1-201ENST00000609511 323 ntBASIC3.28□□□□□ -1.88
PRKNO60260 BX664608.1-201ENST00000610519 487 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AC002550.2-201ENST00000621246 394 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AC103858.2-201ENST00000621471 543 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AC009268.2-201ENST00000621925 457 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AC091953.2-201ENST00000623979 160 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AL160394.1-201ENST00000624765 724 ntBASIC3.28□□□□□ -1.88
PRKNO60260 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.28□□□□□ -1.88
PRKNO60260 OR5H6-203ENST00000642105 978 ntBASIC3.28□□□□□ -1.88
PRKNO60260 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.28□□□□□ -1.88
PRKNO60260 AC009902.3-201ENST00000606235 2172 ntBASIC3.28□□□□□ -1.88
PRKNO60260 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PRKNO60260 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PRKNO60260 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PRKNO60260 RNU6-1249P-201ENST00000363237 111 ntBASIC3.27□□□□□ -1.89
PRKNO60260 MIR183-201ENST00000384958 110 ntBASIC3.27□□□□□ -1.89
PRKNO60260 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PRKNO60260 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PRKNO60260 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.27□□□□□ -1.89
PRKNO60260 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.27□□□□□ -1.89
PRKNO60260 BX323014.1-201ENST00000412876 237 ntBASIC3.27□□□□□ -1.89
PRKNO60260 BX842559.1-201ENST00000419615 532 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.27□□□□□ -1.89
PRKNO60260 AL451062.2-201ENST00000427515 271 ntBASIC3.27□□□□□ -1.89
PRKNO60260 RPL31P35-201ENST00000431058 377 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.27□□□□□ -1.89
PRKNO60260 FTH1P1-201ENST00000437933 532 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.27□□□□□ -1.89
PRKNO60260 RAC1P7-201ENST00000445367 377 ntBASIC3.27□□□□□ -1.89
PRKNO60260 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.27□□□□□ -1.89
PRKNO60260 SNORD121B-201ENST00000458838 81 ntBASIC3.27□□□□□ -1.89
PRKNO60260 U3.44-201ENST00000458938 192 ntBASIC3.27□□□□□ -1.89
PRKNO60260 snoU13.3-201ENST00000459441 104 ntBASIC3.27□□□□□ -1.89
PRKNO60260 RPL7L1P8-201ENST00000469911 741 ntBASIC3.27□□□□□ -1.89
PRKNO60260 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PRKNO60260 AC091133.4-201ENST00000511142 308 ntBASIC3.27□□□□□ -1.89
PRKNO60260 NDUFB4P9-201ENST00000511646 388 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AC023141.12-201ENST00000512399 199 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AC107934.1-201ENST00000522215 217 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.27□□□□□ -1.89
PRKNO60260 CR383656.7-201ENST00000548164 174 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.27□□□□□ -1.89
PRKNO60260 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.27□□□□□ -1.89
PRKNO60260 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.27□□□□□ -1.89
PRKNO60260 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.27□□□□□ -1.89
PRKNO60260 AC136619.2-201ENST00000563361 631 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AL391840.1-201ENST00000571144 367 ntBASIC3.27□□□□□ -1.89
PRKNO60260 MIR3118-1-201ENST00000581787 76 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AC011451.2-201ENST00000604303 598 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AL031176.1-201ENST00000604554 466 ntBASIC3.27□□□□□ -1.89
PRKNO60260 IGHV3-29-201ENST00000604817 344 ntBASIC3.27□□□□□ -1.89
PRKNO60260 HMGB1P50-201ENST00000605814 607 ntBASIC3.27□□□□□ -1.89
PRKNO60260 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.27□□□□□ -1.89
PRKNO60260 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.27□□□□□ -1.89
PRKNO60260 AL161734.1-201ENST00000609720 557 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AL158209.2-201ENST00000619266 216 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AC012314.7-201ENST00000619693 93 ntBASIC3.27□□□□□ -1.89
PRKNO60260 AL159972.1-201ENST00000625150 448 ntBASIC3.27□□□□□ -1.89
PRKNO60260 U6.105-201ENST00000637379 88 ntBASIC3.27□□□□□ -1.89
PRKNO60260 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.27□□□□□ -1.89
PRKNO60260 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms