Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ACTN4O43707 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ACTN4O43707 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ACTN4O43707 AL353796.1-201ENST00000561542 3241 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.1□□□□□ -1.43
ACTN4O43707 Y_RNA.343-201ENST00000365354 112 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ACTN4O43707 Y_RNA.497-201ENST00000384447 98 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 SNORD20-201ENST00000384550 80 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 RNU6-1135P-201ENST00000411083 103 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 BMS1P17-202ENST00000416720 316 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.1□□□□□ -1.43
ACTN4O43707 CYCSP12-201ENST00000437729 300 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC6.1□□□□□ -1.43
ACTN4O43707 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.1□□□□□ -1.43
ACTN4O43707 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ACTN4O43707 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC6.1□□□□□ -1.43
ACTN4O43707 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.1□□□□□ -1.43
ACTN4O43707 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.1□□□□□ -1.43
ACTN4O43707 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.1□□□□□ -1.43
ACTN4O43707 Y_RNA.679-201ENST00000516416 91 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 SNRPGP16-201ENST00000533275 226 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC6.1□□□□□ -1.43
ACTN4O43707 AC023824.2-201ENST00000566185 400 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ACTN4O43707 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.1□□□□□ -1.43
ACTN4O43707 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.1□□□□□ -1.43
ACTN4O43707 AC240442.1-201ENST00000616055 283 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
ACTN4O43707 GVINP1-202ENST00000531871 7271 ntBASIC6.1□□□□□ -1.43
ACTN4O43707 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ACTN4O43707 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ACTN4O43707 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ACTN4O43707 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.1□□□□□ -1.43
ACTN4O43707 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
ACTN4O43707 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
ACTN4O43707 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
ACTN4O43707 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.09□□□□□ -1.43
ACTN4O43707 RNA5SP46-201ENST00000362370 120 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 SNORD50.1-201ENST00000362987 71 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ACTN4O43707 MIR621-201ENST00000384919 96 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 RNU6-918P-201ENST00000391219 106 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 SNORA11.5-201ENST00000408163 128 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 Y_RNA.590-201ENST00000410140 107 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 RPL30P3-201ENST00000424262 333 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 GAPDHP58-201ENST00000438477 1006 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 FHP1-201ENST00000442741 703 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC6.09□□□□□ -1.43
ACTN4O43707 HSPE1P25-201ENST00000455484 251 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 U8.21-201ENST00000459536 136 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 RPS18P6-201ENST00000476880 458 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC6.09□□□□□ -1.43
ACTN4O43707 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC6.09□□□□□ -1.43
ACTN4O43707 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.09□□□□□ -1.43
ACTN4O43707 AP006245.1-201ENST00000522549 120 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.09□□□□□ -1.43
ACTN4O43707 AC120057.2-201ENST00000571520 271 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 RPL23AP87-202ENST00000573039 466 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 PRPF19P1-201ENST00000584766 898 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 AC037487.3-201ENST00000606668 112 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 AL365222.1-201ENST00000614661 98 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 CU639417.4-201ENST00000623928 207 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ACTN4O43707 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ACTN4O43707 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
ACTN4O43707 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
ACTN4O43707 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ACTN4O43707 AC092079.1-201ENST00000558620 1985 ntBASIC6.09□□□□□ -1.43
ACTN4O43707 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.09□□□□□ -1.43
ACTN4O43707 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
ACTN4O43707 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ACTN4O43707 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.08□□□□□ -1.44
ACTN4O43707 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ACTN4O43707 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
ACTN4O43707 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.08□□□□□ -1.44
ACTN4O43707 RPL31P2-201ENST00000413849 377 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 RPS3P2-201ENST00000421346 701 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.08□□□□□ -1.44
ACTN4O43707 CEACAMP7-201ENST00000444105 496 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 snoU109.4-201ENST00000458953 143 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 RN7SKP210-201ENST00000459176 261 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 AP001324.2-201ENST00000461163 319 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 AC074133.1-201ENST00000515696 183 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 MIR2355-201ENST00000517199 87 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.08□□□□□ -1.44
ACTN4O43707 CASP1P1-201ENST00000526345 212 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 AC027369.5-201ENST00000533838 755 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC6.08□□□□□ -1.44
ACTN4O43707 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.08□□□□□ -1.44
ACTN4O43707 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC6.08□□□□□ -1.44
ACTN4O43707 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC6.08□□□□□ -1.44
ACTN4O43707 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.08□□□□□ -1.44
ACTN4O43707 AC123912.5-201ENST00000605470 343 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 MIR8076-201ENST00000611401 83 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC6.08□□□□□ -1.44
ACTN4O43707 RBBP8P1-201ENST00000449447 1844 ntBASIC6.08□□□□□ -1.44
ACTN4O43707 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ACTN4O43707 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms