Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.62□□□□□ -1.99
CLOCKO15516 AC008427.1-201ENST00000503102 655 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.62□□□□□ -1.99
CLOCKO15516 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.62□□□□□ -1.99
CLOCKO15516 AC009901.1-201ENST00000506703 541 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 AC069306.1-201ENST00000507006 843 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 AC112198.4-201ENST00000515450 351 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 RN7SKP31-201ENST00000516354 278 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 RNU6-467P-201ENST00000517027 110 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 SNORA31.21-201ENST00000517180 77 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.62□□□□□ -1.99
CLOCKO15516 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.62□□□□□ -1.99
CLOCKO15516 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.62□□□□□ -1.99
CLOCKO15516 AC087373.1-201ENST00000524920 491 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.62□□□□□ -1.99
CLOCKO15516 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.62□□□□□ -1.99
CLOCKO15516 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.62□□□□□ -1.99
CLOCKO15516 AMZ2P1-203ENST00000565833 850 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 HMGB1P6-201ENST00000569046 646 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.62□□□□□ -1.99
CLOCKO15516 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.62□□□□□ -1.99
CLOCKO15516 AC008739.2-201ENST00000597006 317 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 RPL23AP78-201ENST00000599928 470 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 AL049779.4-201ENST00000604500 156 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 AC243773.3-201ENST00000613270 256 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 AC090132.2-201ENST00000615881 347 ntBASIC2.62□□□□□ -1.99
CLOCKO15516 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.62□□□□□ -1.99
CLOCKO15516 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.62□□□□□ -1.99
CLOCKO15516 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CLOCKO15516 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CLOCKO15516 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.61□□□□□ -1.99
CLOCKO15516 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLOCKO15516 AC005832.2-201ENST00000538921 1430 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.61□□□□□ -1.99
CLOCKO15516 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 AC005539.1-201ENST00000443768 1479 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLOCKO15516 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLOCKO15516 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLOCKO15516 DEFA7P-201ENST00000382676 285 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 AL161449.1-201ENST00000414531 1199 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 MTND4P3-201ENST00000417829 541 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 PTP4A1P7-201ENST00000423476 514 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.61□□□□□ -1.99
CLOCKO15516 TAAR7P-201ENST00000436141 242 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.61□□□□□ -1.99
CLOCKO15516 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.61□□□□□ -1.99
CLOCKO15516 AC234775.1-201ENST00000454247 670 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.61□□□□□ -1.99
CLOCKO15516 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.61□□□□□ -1.99
CLOCKO15516 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.61□□□□□ -1.99
CLOCKO15516 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CLOCKO15516 AC147055.4-201ENST00000504399 745 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 AC016550.1-201ENST00000505348 785 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 HMGB1P28-201ENST00000507778 552 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 RNU6-1225P-201ENST00000516336 65 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 SNORA31.22-201ENST00000517204 135 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.61□□□□□ -1.99
CLOCKO15516 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.61□□□□□ -1.99
CLOCKO15516 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.61□□□□□ -1.99
CLOCKO15516 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.61□□□□□ -1.99
CLOCKO15516 AC090615.1-201ENST00000577519 154 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.61□□□□□ -1.99
CLOCKO15516 ZNF861P-201ENST00000588126 639 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 AC010620.2-201ENST00000600135 313 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 SNHG22-203ENST00000617833 660 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 MIR6130-201ENST00000619419 109 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 AC068880.5-201ENST00000624331 290 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 AC126544.2-201ENST00000625174 749 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CLOCKO15516 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.61□□□□□ -1.99
CLOCKO15516 AP000526.1-201ENST00000603308 1388 ntBASIC2.61□□□□□ -1.99
CLOCKO15516 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.6□□□□□ -1.99
CLOCKO15516 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLOCKO15516 MAPK10-266ENST00000641066 6555 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.6□□□□□ -1.99
CLOCKO15516 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 ZNF271P-202ENST00000465539 1970 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLOCKO15516 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLOCKO15516 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLOCKO15516 RNU1-138P-201ENST00000384093 164 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 Y_RNA.500-201ENST00000384466 111 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 Y_RNA.578-201ENST00000390903 88 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 HMGB1P17-201ENST00000403495 628 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 MRPS36P1-201ENST00000421291 307 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 AL590383.1-201ENST00000428602 75 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.6□□□□□ -1.99
CLOCKO15516 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.6□□□□□ -1.99
CLOCKO15516 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.6□□□□□ -1.99
CLOCKO15516 CR769767.1-201ENST00000436337 346 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 AC107083.1-201ENST00000439643 279 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 AC093156.1-201ENST00000440382 670 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 HMGN1P5-201ENST00000448591 263 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 UBE2DNL-203ENST00000474922 222 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.6□□□□□ -1.99
CLOCKO15516 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.6□□□□□ -1.99
CLOCKO15516 SLC2A13P1-201ENST00000531560 322 ntBASIC2.6□□□□□ -1.99
CLOCKO15516 VN1R78P-201ENST00000597393 564 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms