Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC003685.2-201ENST00000422795 395 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 AL356320.1-201ENST00000429616 163 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 AL512661.1-201ENST00000434586 1253 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 AC011753.1-201ENST00000451001 220 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 VPS26AP1-201ENST00000483197 979 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.08□□□□□ -2.08
UBFD1O14562 AC092436.1-201ENST00000506450 503 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.08□□□□□ -2.08
UBFD1O14562 PRELID3BP4-201ENST00000515476 571 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 AC087808.1-201ENST00000520501 361 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.08□□□□□ -2.08
UBFD1O14562 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.08□□□□□ -2.08
UBFD1O14562 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.08□□□□□ -2.08
UBFD1O14562 BPTFP1-201ENST00000579209 492 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 MIR5694-201ENST00000581190 76 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.08□□□□□ -2.08
UBFD1O14562 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 MFSD8-245ENST00000641743 948 ntBASIC2.08□□□□□ -2.08
UBFD1O14562 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
UBFD1O14562 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.07□□□□□ -2.08
UBFD1O14562 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
UBFD1O14562 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
UBFD1O14562 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
UBFD1O14562 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
UBFD1O14562 RNU6-619P-201ENST00000365146 108 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 SNORA48.3-201ENST00000391081 134 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 AL158050.1-201ENST00000416077 457 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.07□□□□□ -2.08
UBFD1O14562 AC246680.2-201ENST00000422106 389 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 DPH3P2-201ENST00000422618 250 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 RSL24D1P8-201ENST00000434442 492 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 FAM103A2P-201ENST00000444122 354 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.07□□□□□ -2.08
UBFD1O14562 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 AL359385.1-201ENST00000456509 365 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 RPS20P24-201ENST00000457473 361 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.07□□□□□ -2.08
UBFD1O14562 RBM43P1-201ENST00000476891 1081 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 AC108210.2-201ENST00000503681 201 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 MLLT10P2-201ENST00000506434 249 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 SCARNA16.3-201ENST00000516595 184 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 AC124293.1-201ENST00000530034 493 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 LSM6P2-201ENST00000552208 177 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 MED28P6-201ENST00000558776 231 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 DEFB122-202ENST00000569013 197 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.07□□□□□ -2.08
UBFD1O14562 AC245036.5-201ENST00000596330 847 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 ZNF92P2-201ENST00000600543 1059 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 KATNBL1P5-201ENST00000605015 517 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
UBFD1O14562 AC009318.4-201ENST00000620496 486 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 MIR6873-201ENST00000622788 63 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.07□□□□□ -2.08
UBFD1O14562 AC091925.2-201ENST00000625059 256 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
UBFD1O14562 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
UBFD1O14562 MTND4P21-201ENST00000453886 1357 ntBASIC2.07□□□□□ -2.08
UBFD1O14562 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.07□□□□□ -2.08
UBFD1O14562 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
UBFD1O14562 RNU6-792P-201ENST00000363490 107 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 RNU6-650P-201ENST00000365658 111 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 MIR627-201ENST00000384979 97 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 MIR493-201ENST00000385254 89 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 BTF3P7-201ENST00000407097 488 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 HMGB3P2-201ENST00000411913 584 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.06□□□□□ -2.08
UBFD1O14562 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.06□□□□□ -2.08
UBFD1O14562 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
UBFD1O14562 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.06□□□□□ -2.08
UBFD1O14562 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
UBFD1O14562 MTND2P19-201ENST00000449129 1012 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.06□□□□□ -2.08
UBFD1O14562 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.06□□□□□ -2.08
UBFD1O14562 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.06□□□□□ -2.08
UBFD1O14562 RPL30P14-201ENST00000482744 348 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 RPL21P47-201ENST00000483696 477 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 AC090255.1-201ENST00000495779 349 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.06□□□□□ -2.08
UBFD1O14562 RAC1P5-201ENST00000512182 576 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.06□□□□□ -2.08
UBFD1O14562 RNU6-27P-201ENST00000516146 107 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 SNORA76.2-201ENST00000517095 137 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.06□□□□□ -2.08
UBFD1O14562 AL450472.3-201ENST00000615578 367 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.06□□□□□ -2.08
UBFD1O14562 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.06□□□□□ -2.08
UBFD1O14562 CU459211.1-201ENST00000635667 749 ntBASIC2.06□□□□□ -2.08
UBFD1O14562 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
UBFD1O14562 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
UBFD1O14562 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.06□□□□□ -2.08
UBFD1O14562 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
UBFD1O14562 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
UBFD1O14562 OR1L1-202ENST00000373686 1083 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 SNORA51.11-201ENST00000384442 131 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AL023807.1-201ENST00000407932 359 ntBASIC2.05□□□□□ -2.08
UBFD1O14562 AC008173.1-201ENST00000418901 264 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms