Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM38O00635 AC104164.2-201ENST00000496953 495 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM38O00635 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM38O00635 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM38O00635 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM38O00635 AP003467.2-201ENST00000520175 319 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 HMGN1P28-201ENST00000521340 364 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 AP000907.2-201ENST00000530827 353 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 OR4K8P-201ENST00000578842 1048 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 MIR3671-201ENST00000580455 88 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM38O00635 BNIP3P8-201ENST00000597863 560 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 AL162730.1-201ENST00000605734 292 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 HMGB1P50-201ENST00000605814 607 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 AC008536.2-201ENST00000607284 349 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM38O00635 AC004908.2-201ENST00000609090 574 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 AC131902.3-201ENST00000611767 581 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM38O00635 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM38O00635 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM38O00635 AC009033.1-201ENST00000624279 431 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 AC124864.2-201ENST00000624736 186 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM38O00635 AC112487.2-201ENST00000637950 304 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM38O00635 AL138713.1-201ENST00000624026 2130 ntBASIC4.1□□□□□ -1.75
TRIM38O00635 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM38O00635 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM38O00635 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TRIM38O00635 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM38O00635 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM38O00635 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
TRIM38O00635 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TRIM38O00635 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
TRIM38O00635 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM38O00635 RNU6-173P-201ENST00000364215 104 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
TRIM38O00635 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
TRIM38O00635 RNU6-637P-201ENST00000384050 107 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 RNU6-780P-201ENST00000391030 104 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 AC078974.1-201ENST00000411597 223 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM38O00635 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM38O00635 CYP4F29P-201ENST00000420685 446 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM38O00635 AC008850.1-201ENST00000427546 362 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM38O00635 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM38O00635 AC004866.2-201ENST00000438285 481 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM38O00635 RNA5SP246-201ENST00000458909 119 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 snoU13.4-201ENST00000458916 104 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 snoU109.1-201ENST00000459339 135 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 AC055855.1-201ENST00000489563 579 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM38O00635 AC114967.1-201ENST00000504890 259 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM38O00635 KLHL2P1-201ENST00000508691 521 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM38O00635 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM38O00635 RNA5SP143-201ENST00000516936 115 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 RNU6-1073P-201ENST00000517182 106 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 AP002453.2-201ENST00000533503 320 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM38O00635 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM38O00635 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM38O00635 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM38O00635 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM38O00635 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM38O00635 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM38O00635 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 AL158209.2-201ENST00000619266 216 ntBASIC4.09□□□□□ -1.75
TRIM38O00635 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM38O00635 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM38O00635 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
TRIM38O00635 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.09□□□□□ -1.76
TRIM38O00635 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.09□□□□□ -1.76
TRIM38O00635 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM38O00635 RNU4-73P-201ENST00000363164 141 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 RNY4P14-201ENST00000363656 96 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 RNU6-1090P-201ENST00000364065 94 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 RNU6-754P-201ENST00000391166 107 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 PTMAP2-201ENST00000397627 327 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 FCF1P10-201ENST00000407590 479 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 RNU6-248P-201ENST00000410720 107 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM38O00635 RPL21P111-201ENST00000418453 477 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 OR4K11P-201ENST00000431829 904 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM38O00635 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM38O00635 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM38O00635 RAC1P7-201ENST00000445367 377 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AL033528.1-201ENST00000453780 140 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 RAD23BP3-201ENST00000454157 1152 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM38O00635 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM38O00635 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM38O00635 RPS29P19-201ENST00000479709 171 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms