Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 VDAC1P9-201ENST00000412766 841 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.72□□□□□ -1.65
RFXAPO00287 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.72□□□□□ -1.65
RFXAPO00287 AC128713.1-201ENST00000471495 306 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 RN7SL691P-201ENST00000494487 301 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 RPS26P24-201ENST00000497656 331 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 RPL39P5-202ENST00000512505 151 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 CYCSP28-201ENST00000534284 321 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.72□□□□□ -1.65
RFXAPO00287 DUX4L52-201ENST00000549363 777 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.72□□□□□ -1.65
RFXAPO00287 MIR4775-201ENST00000581168 75 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 MIR5690-201ENST00000583739 73 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 Z82243.1-201ENST00000609432 473 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 U2.1-201ENST00000618978 145 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 AC098657.3-201ENST00000620434 263 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 AC092608.2-201ENST00000624427 218 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 AC140479.6-201ENST00000633535 357 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFXAPO00287 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFXAPO00287 KPNA2P1-201ENST00000458289 1591 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.72□□□□□ -1.65
RFXAPO00287 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RFXAPO00287 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFXAPO00287 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RFXAPO00287 AC000374.1-201ENST00000434698 1745 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
RFXAPO00287 MTCO1P7-201ENST00000419523 1542 ntBASIC4.72□□□□□ -1.65
RFXAPO00287 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
RFXAPO00287 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RFXAPO00287 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RFXAPO00287 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
RFXAPO00287 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFXAPO00287 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFXAPO00287 AC125257.1-201ENST00000560400 2930 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFXAPO00287 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFXAPO00287 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
RFXAPO00287 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFXAPO00287 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.71□□□□□ -1.66
RFXAPO00287 AL139276.1-201ENST00000311910 1001 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RFXAPO00287 RNU6-450P-201ENST00000364654 107 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 AL356421.1-201ENST00000403255 413 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.71□□□□□ -1.66
RFXAPO00287 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.71□□□□□ -1.66
RFXAPO00287 RAC1P6-201ENST00000423911 575 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 AC091390.3-201ENST00000426478 338 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.71□□□□□ -1.66
RFXAPO00287 MTND1P17-201ENST00000448961 204 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 AC126389.1-201ENST00000477436 290 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.71□□□□□ -1.66
RFXAPO00287 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.71□□□□□ -1.66
RFXAPO00287 RNU6-120P-201ENST00000516077 103 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 RNU6-406P-201ENST00000516470 107 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 RNU6-256P-201ENST00000516747 97 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.71□□□□□ -1.66
RFXAPO00287 AL353997.4-201ENST00000586196 166 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.71□□□□□ -1.66
RFXAPO00287 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.71□□□□□ -1.66
RFXAPO00287 PRR13P7-201ENST00000605538 430 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 RNU6-84P-201ENST00000607737 102 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 AC062037.2-201ENST00000610137 73 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 uc_338.34-201ENST00000617467 174 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 AL159972.1-201ENST00000625150 448 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RFXAPO00287 CPHL1P-201ENST00000461341 3407 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.71□□□□□ -1.66
RFXAPO00287 ZNF519P1-201ENST00000449011 1626 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 AC244517.1-201ENST00000606030 2086 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
RFXAPO00287 CASC19-204ENST00000641001 2055 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RFXAPO00287 AL672167.1-203ENST00000641299 2975 ntBASIC4.71□□□□□ -1.66
RFXAPO00287 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RFXAPO00287 AC100778.3-201ENST00000580060 1750 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFXAPO00287 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFXAPO00287 AL672167.1-204ENST00000641875 3017 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFXAPO00287 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFXAPO00287 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RFXAPO00287 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
RFXAPO00287 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.7□□□□□ -1.66
RFXAPO00287 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.7□□□□□ -1.66
RFXAPO00287 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFXAPO00287 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.7□□□□□ -1.66
RFXAPO00287 RNA5SP124-201ENST00000362739 110 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 Y_RNA.447-201ENST00000384184 113 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RFXAPO00287 RNU4-6P-201ENST00000410804 122 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 RPL6P29-201ENST00000414863 865 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.7□□□□□ -1.66
RFXAPO00287 AC093151.1-201ENST00000427711 313 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 FTH1P1-201ENST00000437933 532 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 AL500522.2-201ENST00000448562 343 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.7□□□□□ -1.66
RFXAPO00287 RNA5SP103-201ENST00000459503 118 ntBASIC4.7□□□□□ -1.66
RFXAPO00287 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.7□□□□□ -1.66
RFXAPO00287 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms