Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SNORD109B-201ENST00000458961 67 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 SNORD109A-201ENST00000459128 67 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC006499.5-201ENST00000505037 514 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 WBP1LP4-201ENST00000505043 344 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC008834.1-201ENST00000511612 175 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 CCNHP1-201ENST00000513311 678 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC022447.1-201ENST00000515358 464 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC007375.1-201ENST00000554513 578 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 CBX3P2-202ENST00000583365 535 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC017100.2-201ENST00000584628 355 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 KATNBL1P1-201ENST00000605192 748 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 uc_338.5-201ENST00000611839 155 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AP002791.1-201ENST00000623291 381 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC068057.2-201ENST00000624047 895 ntBASIC1.01□□□□□ -2.25
CHKB-CPT1BH3BT56 AC009487.4-201ENST00000624969 3585 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AL360182.1-201ENST00000397433 468 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 RN7SKP51-201ENST00000410781 304 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 RNU6-233P-201ENST00000410845 141 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 RNA5SP450-201ENST00000411206 102 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AL357078.2-201ENST00000416486 427 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AL159987.2-201ENST00000432754 307 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AC233982.1-201ENST00000451247 436 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 RPS4XP10-201ENST00000465034 731 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AC147055.4-201ENST00000504399 745 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 LTV1P1-201ENST00000510683 1237 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 RNU6-1095P-201ENST00000516148 108 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 RNA5SP341-201ENST00000516261 117 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 COX6CP8-201ENST00000522620 226 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AC079600.2-201ENST00000550076 130 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 U4atac.1-201ENST00000618345 95 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 MIR6873-201ENST00000622788 63 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 OR5H6-203ENST00000642105 978 ntBASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1□□□□□ -2.25
CHKB-CPT1BH3BT56 AL356473.1-201ENST00000406203 1408 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 U3.26-201ENST00000391236 204 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 HMGN2P39-201ENST00000398005 273 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AL035405.1-201ENST00000400795 710 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 USP9YP6-201ENST00000413550 854 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 EDDM3CP-201ENST00000415977 425 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 UBE2FP1-201ENST00000416536 447 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 MTCO3P46-201ENST00000425787 232 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 CYCSP32-201ENST00000440548 321 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AL118520.1-201ENST00000450770 291 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AC080013.2-201ENST00000460866 323 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AL049714.1-201ENST00000466686 347 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AC023790.1-201ENST00000482174 347 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 TPT1P8-201ENST00000510120 555 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 DUXAP2-201ENST00000519198 589 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 GNAI2P1-201ENST00000541815 315 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 MIR4419B-201ENST00000577260 68 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 MIR3199-1-201ENST00000582434 88 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AC008121.1-201ENST00000603244 268 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 SEPT7P9-203ENST00000604116 343 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AC055876.5-201ENST00000605667 259 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AL021997.1-201ENST00000605757 193 ntBASIC0.99□□□□□ -2.25
CHKB-CPT1BH3BT56 AC046143.2-201ENST00000609789 160 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms