Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC079395.1-201ENST00000510981 262 ntBASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 EEF1A1P37-201ENST00000522748 715 ntBASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC022662.1-201ENST00000580252 331 ntBASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC013244.3-201ENST00000605614 388 ntBASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC005046.1-201ENST00000608515 625 ntBASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC013470.4-201ENST00000619978 986 ntBASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 AP003122.6-201ENST00000623831 495 ntBASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 MIR4496-201ENST00000635896 61 ntBASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 MAPK10-322ENST00000641485 4530 ntBASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 PABPC1P7-201ENST00000413177 1513 ntBASIC2.63□□□□□ -1.99
TMX2-CTNND1H3BSU7 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 MAPK10-266ENST00000641066 6555 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AP006437.1-201ENST00000641440 3685 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC016769.3-201ENST00000396562 315 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU4-65P-201ENST00000410473 140 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL133384.1-201ENST00000412744 351 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 MTCYBP24-201ENST00000420387 1106 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 FNDC3CP-201ENST00000420795 1155 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 XKRYP1-201ENST00000423438 492 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 XKRYP2-201ENST00000432915 492 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 ATP5F1P1-201ENST00000433775 569 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 RPL23AP74-201ENST00000437246 471 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 MTND2P20-201ENST00000440805 661 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL590399.6-201ENST00000446396 307 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 MTCO1P48-201ENST00000448024 1096 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 RPL21P134-201ENST00000453468 483 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC008571.1-201ENST00000467232 300 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 HMGB1P28-201ENST00000507778 552 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU6-826P-201ENST00000516827 104 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 Y_RNA.717-201ENST00000517106 92 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AP001646.1-201ENST00000527936 915 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 HSPE1P20-201ENST00000538133 289 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 NBEAP1-201ENST00000554452 979 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 ZNF861P-201ENST00000588126 639 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL356575.1-201ENST00000603008 283 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC021749.1-201ENST00000604322 607 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC007349.4-201ENST00000608114 532 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 MIR6817-201ENST00000615588 66 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL590808.1-201ENST00000618696 141 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC092650.2-201ENST00000619984 902 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC011330.2-201ENST00000621680 635 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC068787.1-201ENST00000623908 691 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 ZNF876P-202ENST00000398732 1485 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AP000776.1-201ENST00000530032 1663 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC107982.1-201ENST00000507171 1300 ntBASIC2.62□□□□□ -1.99
TMX2-CTNND1H3BSU7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 TAB3P1-202ENST00000452645 1634 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU6-989P-201ENST00000362756 107 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 RNU1-112P-201ENST00000364401 164 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 SSXP10-201ENST00000402595 565 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 RPS24P7-201ENST00000416921 246 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC244098.2-201ENST00000422068 99 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 RPL18AP17-201ENST00000455326 198 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 TRBV26-201ENST00000456572 344 ntBASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.61□□□□□ -1.99
TMX2-CTNND1H3BSU7 TRBV12-1-201ENST00000479785 344 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms