Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 DUTP6-201ENST00000425573 462 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC115115.1-201ENST00000449927 248 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 RN7SL517P-201ENST00000462240 305 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC006512.1-201ENST00000468816 291 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC078817.1-201ENST00000492623 435 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC098591.2-201ENST00000510152 315 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 ERHP1-201ENST00000523006 310 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 SUB1P1-201ENST00000524415 382 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC103843.2-201ENST00000530523 682 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 OR5B10P-201ENST00000532869 642 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 MIR4703-201ENST00000577728 79 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC010928.3-201ENST00000587712 541 ntBASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC85CA6NKD9 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 RNU6-188P-201ENST00000364207 107 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 SMIM11P1-201ENST00000369586 178 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 SNORA36C-201ENST00000384289 132 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 SNORA24.1-201ENST00000384401 135 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 MIR30B-201ENST00000384850 88 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AL161631.1-201ENST00000417933 486 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 ZNF863P-201ENST00000426746 417 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AC098614.3-201ENST00000438957 440 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 RPL23AP11-201ENST00000475260 469 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AC008549.1-201ENST00000512900 643 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 ADI1P3-201ENST00000549509 470 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 UBE2V2P2-201ENST00000587677 504 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AC174048.1-201ENST00000603389 144 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 AC079587.1-201ENST00000603846 277 ntBASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CCDC85CA6NKD9 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 RNU1-14P-201ENST00000362759 152 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 RNU6-552P-201ENST00000362869 119 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 SNORD115-7-201ENST00000365306 82 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 MIR514A2-201ENST00000385131 88 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 MIR514A3-201ENST00000385132 88 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 RNU6-903P-201ENST00000391270 109 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 SOD2P1-201ENST00000396543 562 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AL583835.1-201ENST00000399570 407 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 TOMM22P1-201ENST00000418578 312 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 MTCYBP8-201ENST00000422855 651 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AC024082.2-201ENST00000434771 238 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 USP9YP7-201ENST00000436723 430 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AL031584.1-201ENST00000447169 754 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AC020550.1-201ENST00000447385 163 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AL162388.1-201ENST00000450912 352 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 USP9YP32-201ENST00000452432 430 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 ISCUP1-201ENST00000454451 448 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 RPS29P15-201ENST00000458329 171 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 AC010285.1-201ENST00000470580 392 ntBASIC4.86□□□□□ -1.63
CCDC85CA6NKD9 RN7SL812P-201ENST00000493791 279 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms