Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-50P-201ENST00000362356 103 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-552P-201ENST00000362869 119 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-288P-201ENST00000363690 104 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 SNORD115-7-201ENST00000365306 82 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RNU1-13P-201ENST00000384499 162 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 MIR1290-201ENST00000408735 78 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RNA5SP317-201ENST00000410176 116 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RNA5SP311-201ENST00000411290 116 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-387P-201ENST00000411331 105 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AC068533.1-201ENST00000418542 415 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RPL30P16-201ENST00000419341 429 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AL109913.1-201ENST00000421173 514 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RPS6P12-201ENST00000432491 726 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AL445433.1-201ENST00000457507 257 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-953P-201ENST00000459154 107 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AC074344.1-201ENST00000512823 224 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AC025465.4-201ENST00000513422 638 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RNU6-123P-201ENST00000516163 102 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RNA5SP315-201ENST00000516340 116 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RN7SKP60-201ENST00000516985 239 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RNA5SP312-201ENST00000517068 116 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 CBX3P5-201ENST00000552017 521 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AL352979.3-201ENST00000553515 247 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AL161729.3-201ENST00000603533 673 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AL160290.3-201ENST00000604869 165 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 Z98200.1-201ENST00000607298 470 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 RMST_3.1-201ENST00000611651 109 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AC012409.4-201ENST00000612923 249 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AC024614.3-201ENST00000637860 256 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 PNPT1P2-201ENST00000456768 2050 ntBASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
MBD3L4A6NDZ8 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AP001642.1-201ENST00000624727 2117 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RIOK3P1-201ENST00000418778 1528 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AL354685.2-201ENST00000448218 1447 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RN7SKP280-201ENST00000364196 304 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AL583835.1-201ENST00000399570 407 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AL136116.1-201ENST00000403591 381 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RNA5SP129-201ENST00000410276 118 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RNU2-29P-201ENST00000410423 189 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AL513331.1-201ENST00000411908 397 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AC092809.3-201ENST00000415453 231 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 MTND4P25-201ENST00000441039 533 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 HSFY6P-201ENST00000445573 403 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RPL23AP81-201ENST00000455252 467 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RPL37P6-201ENST00000460682 294 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AL591473.1-201ENST00000464297 313 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RPS29P25-201ENST00000481709 171 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RN7SL604P-201ENST00000492589 296 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RBBP4P6-201ENST00000508098 202 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RNU4-29P-201ENST00000515943 174 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 SNORA70.16-201ENST00000516390 95 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 SCARNA15.2-201ENST00000516409 127 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RNA5SP519-201ENST00000516480 119 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 SNORD60.2-201ENST00000516883 86 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 RN7SKP289-201ENST00000517244 295 ntBASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.82□□□□□ -1.8
MBD3L4A6NDZ8 SUMO2P20-201ENST00000520803 283 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms