Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 Y_RNA.675-201ENST00000516389 149 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 RN7SKP219-201ENST00000516825 296 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC66A2RUB6 PSMA2P1-201ENST00000526365 646 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 AC103843.2-201ENST00000530523 682 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 BNIP3P6-201ENST00000549284 499 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 AC125611.2-201ENST00000551907 647 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 AC037471.2-201ENST00000564941 598 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC66A2RUB6 AC091042.1-201ENST00000579213 173 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 MIR4775-201ENST00000581168 75 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 MIR4270-201ENST00000581799 70 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.68□□□□□ -1.66
CCDC66A2RUB6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC66A2RUB6 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC66A2RUB6 AC010680.4-201ENST00000605334 543 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 Z98200.1-201ENST00000607298 470 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC66A2RUB6 FRG1KP-201ENST00000623592 341 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 AC090617.10-201ENST00000624308 134 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 AP003400.5-201ENST00000624827 617 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 MTND1P37-201ENST00000636562 264 ntBASIC4.68□□□□□ -1.66
CCDC66A2RUB6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC66A2RUB6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC66A2RUB6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC66A2RUB6 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC66A2RUB6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AL136964.1-201ENST00000622038 2990 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AL356432.1-201ENST00000405809 419 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 RN7SKP32-201ENST00000410167 303 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 RNU4-65P-201ENST00000410473 140 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AL137014.1-201ENST00000420490 1226 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 BEND7P1-201ENST00000422058 457 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 RPL36AP6-201ENST00000435770 321 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 RPL23AP43-201ENST00000446445 471 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 MTND3P16-201ENST00000452205 344 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 SNORD97-201ENST00000459187 142 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 RPS15AP36-201ENST00000492022 382 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 RPL7P23-201ENST00000493874 747 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 SUMO2P20-201ENST00000520803 283 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AP005435.4-201ENST00000529514 284 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AL160290.3-201ENST00000604869 165 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AC007742.2-201ENST00000618226 398 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AC009248.2-201ENST00000619826 254 ntBASIC4.67□□□□□ -1.66
CCDC66A2RUB6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CCDC66A2RUB6 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AL157700.1-201ENST00000561973 1432 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AL139276.1-201ENST00000311910 1001 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 Y_RNA.231-201ENST00000364358 102 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 RNA5SP239-201ENST00000410218 129 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 RPL23AP26-201ENST00000412728 464 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 RPS20P15-201ENST00000412792 311 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 DUTP6-201ENST00000425573 462 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AC016712.1-201ENST00000431088 378 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 H2AFZP6-201ENST00000444403 394 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 HMGN2P26-201ENST00000463169 339 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 RN7SL585P-201ENST00000470538 280 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 RPS27AP1-201ENST00000475545 471 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AC025554.1-201ENST00000505641 188 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AC004062.1-201ENST00000509926 645 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 OR5AL2P-201ENST00000532185 920 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC66A2RUB6 MIR4795-201ENST00000584182 89 ntBASIC4.66□□□□□ -1.66
CCDC66A2RUB6 AC044792.1-201ENST00000593294 196 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms