Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC023194.1-201ENST00000493084 308 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 HMGB1P22-201ENST00000505315 124 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC100870.1-201ENST00000522035 505 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AP004371.1-201ENST00000525240 214 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC011979.2-201ENST00000527568 352 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 CCNG2P1-201ENST00000549521 1000 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 BNIP3P5-201ENST00000562290 498 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC012182.1-201ENST00000570133 895 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC119501.1-201ENST00000603646 475 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC006077.1-201ENST00000604746 343 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 AC243312.2-201ENST00000623340 601 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 LRRC77P-213ENST00000637727 880 ntBASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TCRBV7S3A2A0A539 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 RNU5E-8P-201ENST00000363502 116 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-1097P-201ENST00000363586 107 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 SNORD3H-201ENST00000384486 214 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AL138878.1-201ENST00000405131 347 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AMD1P2-201ENST00000412936 992 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 MTCO3P12-201ENST00000416718 547 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC006989.1-201ENST00000427212 131 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 DPPA2P1-201ENST00000428060 556 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC090774.1-201ENST00000435925 246 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 USP9YP7-201ENST00000436723 430 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 RPS29P7-201ENST00000439662 171 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 USP9YP32-201ENST00000452432 430 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC068305.1-201ENST00000497406 726 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 ARL4AP2-201ENST00000507378 601 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC009646.1-201ENST00000510455 318 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 Vault.1-201ENST00000516474 102 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 NDUFB9P3-201ENST00000521269 501 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC105224.1-201ENST00000587055 421 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 BNIP3P33-201ENST00000598912 569 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC005344.1-201ENST00000613391 459 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AL450472.3-201ENST00000615578 367 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC006338.1-201ENST00000618453 749 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC015967.1-201ENST00000619893 476 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC119674.1-207ENST00000641355 633 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 CR848007.1-201ENST00000442354 1699 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 AC068647.1-201ENST00000489539 2265 ntBASIC3.67□□□□□ -1.82
TCRBV7S3A2A0A539 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 DDX10P1-201ENST00000448545 1933 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 ELF2P3-201ENST00000445099 1506 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 Y_RNA.159-201ENST00000363674 87 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 RNU6-882P-201ENST00000391025 103 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 NPM1P49-201ENST00000448027 714 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 NDUFS5P3-201ENST00000450668 321 ntBASIC3.66□□□□□ -1.82
TCRBV7S3A2A0A539 AL049714.1-201ENST00000466686 347 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms