Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 OR5P1P-201ENST00000299512 925 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU1-63P-201ENST00000383902 164 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-38P-201ENST00000384085 107 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-14P-201ENST00000384630 106 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 MIR514A2-201ENST00000385131 88 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 MIR514A3-201ENST00000385132 88 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNA5SP372-201ENST00000390836 115 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-550P-201ENST00000391057 101 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RN7SKP177-201ENST00000410567 355 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 Y_RNA.615-201ENST00000410769 117 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-387P-201ENST00000411331 105 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPS20P14-201ENST00000412545 360 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 MTND3P23-201ENST00000431980 347 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 ERLEC1P1-201ENST00000433806 578 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPL21P112-201ENST00000434403 463 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-333P-201ENST00000459117 107 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RN7SL98P-201ENST00000462271 300 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AP000873.1-201ENST00000463987 400 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPS23P7-201ENST00000466210 444 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC092451.1-201ENST00000480211 153 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RN7SL817P-201ENST00000480777 288 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC108022.1-201ENST00000493466 478 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC083829.1-201ENST00000503756 657 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC098591.2-201ENST00000510152 315 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 Y_RNA.689-201ENST00000516589 107 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RN7SKP60-201ENST00000516985 239 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC078814.3-201ENST00000553036 491 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC023575.1-201ENST00000580510 358 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 BDH2P1-201ENST00000602288 736 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC104763.2-201ENST00000604179 382 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL670379.4-201ENST00000605279 254 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-89P-201ENST00000606519 100 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL365204.3-201ENST00000612448 685 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL023881.1-201ENST00000621088 301 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL136221.1-201ENST00000621449 509 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC091905.2-201ENST00000623143 306 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC099654.5-201ENST00000636479 350 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 OR4G2P-202ENST00000641004 1759 ntBASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
IGHV4-28A0A0C4DH34 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 TPTE2P4-201ENST00000258589 1605 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL672167.1-203ENST00000641299 2975 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-288P-201ENST00000363690 104 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-116P-201ENST00000384042 109 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 SNORA32.2-201ENST00000384049 122 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU6-767P-201ENST00000384132 107 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 MIR195-201ENST00000385194 87 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 HSPD1P16-201ENST00000402302 394 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 RNU2-41P-201ENST00000410991 178 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 EEF1A1P40-201ENST00000412883 573 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC011933.1-201ENST00000413334 321 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPL21P91-201ENST00000429231 479 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPS29P17-201ENST00000430795 166 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC116533.1-201ENST00000459748 321 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPL21P8-201ENST00000465083 535 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 RPL5P30-201ENST00000465511 891 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 RN7SL385P-201ENST00000468873 276 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC109327.1-201ENST00000471666 403 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 RN7SL41P-201ENST00000476144 297 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 S100A11P1-201ENST00000477525 312 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 AP000926.1-201ENST00000479573 241 ntBASIC3.19□□□□□ -1.9
IGHV4-28A0A0C4DH34 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms