Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 AL356320.2-201ENST00000417263 507 ntBASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 RPL7P30-201ENST00000420888 709 ntBASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 ARL5AP3-201ENST00000439327 386 ntBASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 DPPA3P1-201ENST00000448050 469 ntBASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 AC108734.3-201ENST00000481241 1165 ntBASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 RPS15AP34-201ENST00000487776 387 ntBASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 AC090255.1-201ENST00000495779 349 ntBASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 AC096751.1-202ENST00000502691 1067 ntBASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 AC113155.1-201ENST00000511141 769 ntBASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 RN7SKP96-201ENST00000516948 297 ntBASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 AC128687.1-201ENST00000605304 619 ntBASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
TRAV17A0A0B4J275 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 RNA5SP258-201ENST00000362750 119 ntBASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 RNA5SP190-201ENST00000365222 118 ntBASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 Y_RNA.338-201ENST00000365320 114 ntBASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 MIR9-3-201ENST00000385084 90 ntBASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 AL513475.1-201ENST00000406602 315 ntBASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 MLLT10P2-201ENST00000506434 249 ntBASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 OR1S1-201ENST00000624470 978 ntBASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 MTCO1P6-201ENST00000481192 1384 ntBASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 AC123912.3-201ENST00000600907 1367 ntBASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
TRAV17A0A0B4J275 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 CKAP2P1-201ENST00000555477 2049 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 RNU6-374P-201ENST00000364146 108 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 RNU6-1072P-201ENST00000384703 107 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 RNU6-443P-201ENST00000384780 107 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 MIR1294-201ENST00000408503 142 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 RNU4-72P-201ENST00000410754 173 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 RNU4-78P-201ENST00000410940 126 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 LUZP4P1-201ENST00000415420 344 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 MTCO3P12-201ENST00000416718 547 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 HMGN2P38-201ENST00000423806 265 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 IPO7P1-201ENST00000442031 636 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 RPL23AP7-203ENST00000449021 469 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 AL359385.1-201ENST00000456509 365 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 AC107398.1-201ENST00000486904 505 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
TRAV17A0A0B4J275 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 Z98749.2-208ENST00000381646 500 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 RNU1-52P-201ENST00000384190 164 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 Y_RNA.493-201ENST00000384422 102 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 U3.40-201ENST00000408706 208 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AC073264.1-201ENST00000411508 416 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AL513331.1-201ENST00000411908 397 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 HMGB3P2-201ENST00000411913 584 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 NDUFB4P6-201ENST00000436819 366 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AC109471.1-201ENST00000511631 612 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 RNU6-250P-201ENST00000516958 103 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 NDUFS5P6-201ENST00000529136 295 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AC009127.3-201ENST00000570531 403 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 RPS15AP11-201ENST00000594193 385 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AC073111.2-201ENST00000605657 1075 ntBASIC1.65□□□□□ -2.15
TRAV17A0A0B4J275 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms