Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 MT-TC-201ENST00000387405 66 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 MTND4LP20-201ENST00000402379 270 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AP000567.1-201ENST00000406413 156 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 HMGN1P14-201ENST00000412459 517 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 RPS7P15-201ENST00000415804 584 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 PSMA6P3-201ENST00000428242 164 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 MTCYBP45-201ENST00000435243 565 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC091862.1-201ENST00000438016 1100 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 TXNP1-201ENST00000441872 371 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 MTCO1P42-201ENST00000457379 726 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AP001992.1-205ENST00000462248 379 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 RPL21P10-201ENST00000463521 490 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 LARP1BP2-201ENST00000486594 519 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 OR5H5P-201ENST00000503164 928 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 CDC42P4-201ENST00000510507 563 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC093677.1-201ENST00000514414 678 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 IGKV2-26-201ENST00000518305 343 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 IGKV2D-36-201ENST00000518643 226 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC022878.1-201ENST00000530684 149 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC010546.1-201ENST00000569391 485 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 MIR3944-201ENST00000581277 108 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AL589743.7-201ENST00000612637 233 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC138932.5-201ENST00000617759 563 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 MIR7975-201ENST00000619350 68 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 AC010733.2-201ENST00000589496 5702 ntBASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX9Q9Y5X1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC093010.3-201ENST00000570269 15214 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 SNORD82-201ENST00000365530 70 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 RNU6-744P-201ENST00000365557 107 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 RNU6-1316P-201ENST00000384242 108 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 SNORD115.1-201ENST00000391109 76 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 Y_RNA.598-201ENST00000410480 95 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 Y_RNA.608-201ENST00000410647 95 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 MTCO1P17-201ENST00000411522 491 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 GLRXP1-201ENST00000423261 334 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 RPL21P66-201ENST00000426566 466 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 BX890604.2-201ENST00000427883 474 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC097713.2-201ENST00000430199 356 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AL662791.1-201ENST00000441992 928 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 PAXBP1P1-201ENST00000449315 447 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 SUMO2P2-201ENST00000456482 255 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 HMGN2P16-201ENST00000456802 261 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 PHBP14-201ENST00000512887 367 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 RNU6-1003P-201ENST00000517099 105 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC109635.4-202ENST00000531666 412 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AL845331.3-202ENST00000562856 261 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC091805.2-201ENST00000603848 235 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 SEPT7P9-203ENST00000604116 343 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC025588.3-201ENST00000604182 274 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AL590282.1-201ENST00000610379 1136 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 MIR8058-201ENST00000615737 89 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC018755.4-201ENST00000619715 454 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC022149.2-201ENST00000621061 203 ntBASIC3.69□□□□□ -1.82
SNX9Q9Y5X1 AC095031.1-201ENST00000623685 672 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms