Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AC123904.3-201ENST00000547218 814 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 ARL2BPP2-201ENST00000550907 489 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 SNHG22-203ENST00000617833 660 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 DUXAP9-208ENST00000622815 614 ntBASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 FER-210ENST00000628534 558 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PCDHA3Q9Y5H8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-335P-201ENST00000364563 113 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 SNORA62-201ENST00000365493 153 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 RNU5E-6P-201ENST00000365574 115 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-629P-201ENST00000384061 103 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 U3.22-201ENST00000391120 215 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC068050.1-201ENST00000394891 380 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AL136372.1-201ENST00000403060 228 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 SSXP9-201ENST00000417503 292 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 ZNF90P2-204ENST00000419323 1075 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 PPP1R11P2-201ENST00000423543 382 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 RPL18P10-201ENST00000425606 538 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AL606489.2-201ENST00000433886 234 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 CALM1P1-201ENST00000442082 433 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 MTCO3P45-201ENST00000443036 613 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 TPT1P12-201ENST00000448968 492 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 SNRPGP6-201ENST00000451124 220 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC126389.1-201ENST00000477436 290 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC091167.1-201ENST00000492017 396 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 RN7SL604P-201ENST00000492589 296 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC069439.1-201ENST00000494739 167 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC108475.1-201ENST00000507880 950 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC026726.1-201ENST00000512859 601 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 SNORA40.12-201ENST00000516329 111 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-835P-201ENST00000516974 104 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AP004371.1-201ENST00000525240 214 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC125611.2-201ENST00000551907 647 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC012182.1-201ENST00000570133 895 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 MIR4277-201ENST00000578298 84 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 SNORD84-203ENST00000584275 78 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 MIR3653-201ENST00000625572 110 ntBASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHA3Q9Y5H8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 CKAP2P1-201ENST00000555477 2049 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 LARP1BP1-201ENST00000506036 1359 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC073343.1-201ENST00000328239 651 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 RN7SKP44-201ENST00000363602 316 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-960P-201ENST00000364056 120 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 RNU4-48P-201ENST00000365559 182 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-877P-201ENST00000383868 107 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 RPS3AP24-201ENST00000407896 734 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 RNU2-9P-201ENST00000410194 145 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 RNU2-36P-201ENST00000410361 191 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 RPL23AP26-201ENST00000412728 464 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 RPL7AP73-201ENST00000413490 353 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 OR51A5P-201ENST00000415429 942 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 SNRPEP10-201ENST00000420249 274 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 RPL36AP6-201ENST00000435770 321 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 DPPA3P1-201ENST00000448050 469 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AC093840.1-201ENST00000511599 336 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 RNU6-358P-201ENST00000516564 75 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 HMGB1P41-201ENST00000520234 440 ntBASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.19□□□□□ -1.74
PCDHA3Q9Y5H8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms