Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 RNU6-525P-201ENST00000363685 104 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 RNU6-1251P-201ENST00000364502 107 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 OR1L1-202ENST00000373686 1083 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 RNA5SP354-201ENST00000391247 136 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 MCTS2P-201ENST00000394552 546 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 RN7SKP101-201ENST00000411376 320 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 Z85995.1-201ENST00000415547 335 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 DPH3P2-201ENST00000422618 250 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 HSFY1P1-201ENST00000423928 1178 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 AC010881.1-201ENST00000433830 235 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 AL512661.1-201ENST00000434586 1253 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 RPL31P50-201ENST00000471002 296 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 AC108043.1-201ENST00000512696 574 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 HSPE1P18-201ENST00000517602 280 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 AP001804.3-201ENST00000525146 880 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 AC110588.1-201ENST00000559699 137 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 OR4G1P-201ENST00000588632 938 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 AC002487.1-201ENST00000604565 994 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 AL392048.1-201ENST00000613946 534 ntBASIC1.51□□□□□ -2.17
AP4S1Q9Y587 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.51□□□□□ -2.17
AP4S1Q9Y587 SDAD1P2-201ENST00000441308 2028 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AL022578.1-201ENST00000439330 1433 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 RNA5SP88-201ENST00000365560 109 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 RNA5SP80-201ENST00000410475 111 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 MTCO3P12-201ENST00000416718 547 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.5□□□□□ -2.17
AP4S1Q9Y587 TRGVB-201ENST00000453257 471 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.5□□□□□ -2.17
AP4S1Q9Y587 PMCHL2-203ENST00000457791 237 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 RPL23AP42-201ENST00000471152 471 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AC104687.1-201ENST00000485829 412 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.5□□□□□ -2.17
AP4S1Q9Y587 RNA5SP182-201ENST00000516064 82 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 ATP5F1P5-201ENST00000526403 760 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AC068339.2-201ENST00000534395 618 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.5□□□□□ -2.17
AP4S1Q9Y587 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AC090888.1-201ENST00000561335 1141 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 MIR548Y-201ENST00000582739 110 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 BNIP3P33-201ENST00000598912 569 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AC040174.2-201ENST00000602701 465 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.5□□□□□ -2.17
AP4S1Q9Y587 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AL161423.1-201ENST00000613700 262 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AC098679.5-201ENST00000624394 571 ntBASIC1.5□□□□□ -2.17
AP4S1Q9Y587 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
AP4S1Q9Y587 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
AP4S1Q9Y587 AC092881.1-201ENST00000638218 2733 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.49□□□□□ -2.17
AP4S1Q9Y587 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
AP4S1Q9Y587 RNU6-618P-201ENST00000363518 112 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.49□□□□□ -2.17
AP4S1Q9Y587 RNA5SP425-201ENST00000410336 112 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.49□□□□□ -2.17
AP4S1Q9Y587 AL445183.3-201ENST00000414168 502 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 Z98742.3-201ENST00000418637 326 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 TMEM167AP1-201ENST00000423409 219 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 AL590762.3-201ENST00000436372 640 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 RPL7P54-201ENST00000438336 674 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 AL353705.4-201ENST00000449661 238 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 AL121769.1-201ENST00000469473 401 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 AC055731.1-201ENST00000474387 401 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.49□□□□□ -2.17
AP4S1Q9Y587 AC109471.1-201ENST00000511631 612 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 RNU6-1308P-201ENST00000516817 103 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 SNORA31.18-201ENST00000517043 134 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 AP004607.1-201ENST00000524456 203 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 SNRPGP16-201ENST00000533275 226 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 MIR3200-201ENST00000580767 85 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 AL160281.1-201ENST00000605307 311 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.49□□□□□ -2.17
AP4S1Q9Y587 MIR6798-201ENST00000612887 67 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.49□□□□□ -2.17
AP4S1Q9Y587 MTND5P10-201ENST00000603719 1809 ntBASIC1.49□□□□□ -2.17
AP4S1Q9Y587 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
AP4S1Q9Y587 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.48□□□□□ -2.17
AP4S1Q9Y587 AC022031.1-201ENST00000585985 2593 ntBASIC1.48□□□□□ -2.17
AP4S1Q9Y587 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
AP4S1Q9Y587 UBE2L2-201ENST00000254302 429 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms