Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL355493.4-201ENST00000618530 292 ntBASIC3.02□□□□□ -1.93
ATG4BQ9Y4P1 AC009039.2-201ENST00000624524 529 ntBASIC3.02□□□□□ -1.93
ATG4BQ9Y4P1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.02□□□□□ -1.93
ATG4BQ9Y4P1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.02□□□□□ -1.93
ATG4BQ9Y4P1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.02□□□□□ -1.93
ATG4BQ9Y4P1 AC103988.1-201ENST00000566382 2177 ntBASIC3.02□□□□□ -1.93
ATG4BQ9Y4P1 AC087359.1-201ENST00000508335 1740 ntBASIC3.02□□□□□ -1.93
ATG4BQ9Y4P1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AP000526.1-201ENST00000603308 1388 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 GABRG2-229ENST00000641017 3628 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 RPL21P132-201ENST00000331267 462 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 RNU6-723P-201ENST00000383973 107 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AC245291.1-201ENST00000419501 328 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AC012498.1-201ENST00000424037 437 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 NDUFB4P6-201ENST00000436819 366 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 THAP5P1-201ENST00000439089 262 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 ELOCP23-201ENST00000452014 332 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AL359385.1-201ENST00000456509 365 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AC034159.1-201ENST00000513885 583 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 Y_RNA.717-201ENST00000517106 92 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AC011260.1-201ENST00000578420 472 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AP001429.1-201ENST00000602568 530 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AL158211.4-201ENST00000606988 584 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AC100793.4-201ENST00000613683 429 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 AC104454.1-201ENST00000421341 1401 ntBASIC3.01□□□□□ -1.93
ATG4BQ9Y4P1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 MIR493-201ENST00000385254 89 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 TAS2R15P-201ENST00000390674 928 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 MTND1P21-201ENST00000412991 285 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AL356867.1-201ENST00000429623 299 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 OR4K11P-201ENST00000431829 904 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AL353705.1-201ENST00000433468 480 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 YWHAZP7-201ENST00000436906 631 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC006028.1-201ENST00000438379 402 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC108734.1-201ENST00000439549 399 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC125238.1-201ENST00000448842 249 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 OR6C5P-201ENST00000452388 923 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC021382.1-201ENST00000483523 359 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AP001025.2-201ENST00000490908 477 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 MTCYBP35-201ENST00000503630 1137 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC109464.2-201ENST00000510242 943 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 MTND5P4-201ENST00000514978 288 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC026801.2-201ENST00000515352 425 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 SNORA74D-201ENST00000516404 141 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 RN7SKP57-201ENST00000517248 293 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 LRRC34P1-201ENST00000542742 915 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC034268.2-201ENST00000571784 482 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 MIR3200-201ENST00000580767 85 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 MIR4999-201ENST00000585029 91 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AP002791.1-201ENST00000623291 381 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AL159972.1-201ENST00000625150 448 ntBASIC3□□□□□ -1.93
ATG4BQ9Y4P1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
ATG4BQ9Y4P1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 RNA5SP383-201ENST00000362934 120 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 RNA5SP88-201ENST00000365560 109 ntBASIC2.99□□□□□ -1.93
ATG4BQ9Y4P1 MIR483-201ENST00000385070 76 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms