Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM35Q9UPQ4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC7.2□□□□□ -1.26
TRIM35Q9UPQ4 AP000769.2-201ENST00000602344 396 ntBASIC7.2□□□□□ -1.26
TRIM35Q9UPQ4 AC009314.1-201ENST00000603871 304 ntBASIC7.2□□□□□ -1.26
TRIM35Q9UPQ4 MIR8080-201ENST00000622224 89 ntBASIC7.2□□□□□ -1.26
TRIM35Q9UPQ4 CR392039.4-201ENST00000624968 501 ntBASIC7.2□□□□□ -1.26
TRIM35Q9UPQ4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TRIM35Q9UPQ4 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
TRIM35Q9UPQ4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 RNA5SP183-201ENST00000362452 119 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 RN7SKP229-201ENST00000410465 302 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 RPL7AP73-201ENST00000413490 353 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 AC022022.1-201ENST00000430304 178 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 LINC02210-201ENST00000444561 288 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 AL162389.1-201ENST00000449233 177 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 AC073901.1-201ENST00000462471 408 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 RNA5SP76-201ENST00000516277 87 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 AC087360.1-201ENST00000518788 616 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 NDUFB4P11-201ENST00000560510 395 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 AC008749.1-201ENST00000597650 306 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 AC123912.5-201ENST00000605470 343 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 AL355480.1-201ENST00000629041 99 ntBASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TRIM35Q9UPQ4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 AC006600.2-201ENST00000624834 2506 ntBASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 MIR133B-201ENST00000362210 119 ntBASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 RNA5SP335-201ENST00000363817 110 ntBASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 SRSF1P1-201ENST00000424058 520 ntBASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 CYCSP12-201ENST00000437729 300 ntBASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 RNU6-638P-201ENST00000516582 104 ntBASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 DEFB131C-201ENST00000528817 165 ntBASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 AC126177.5-201ENST00000549599 178 ntBASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 AC109309.2-201ENST00000612597 332 ntBASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 U4.7-201ENST00000638126 106 ntBASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 AC079776.5-201ENST00000641920 211 ntBASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 AC009951.1-201ENST00000623674 2614 ntBASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TRIM35Q9UPQ4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 AC144833.1-201ENST00000567953 4089 ntBASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 SNORD73B-201ENST00000364394 72 ntBASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 MIR578-201ENST00000384828 96 ntBASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 MRPS10P1-201ENST00000448483 130 ntBASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 AC091912.1-201ENST00000511351 248 ntBASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 AC136777.2-201ENST00000522979 358 ntBASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 MIR15A-201ENST00000607334 83 ntBASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 AC011603.4-201ENST00000611325 277 ntBASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC7.17□□□□□ -1.26
TRIM35Q9UPQ4 AC007159.1-201ENST00000566529 4706 ntBASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 RNA5SP319-201ENST00000362768 119 ntBASIC7.16□□□□□ -1.26
TRIM35Q9UPQ4 RPS12P23-201ENST00000419579 400 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms