Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AL033523.1-201ENST00000605153 153 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AC104237.2-201ENST00000612456 443 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AC119744.1-201ENST00000454746 1715 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 RNU6-985P-201ENST00000410182 104 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 AL136133.1-201ENST00000413694 376 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 BEND7P1-201ENST00000422058 457 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 SNRPEP7-201ENST00000438350 220 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 RPS3AP46-201ENST00000448352 682 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 TRBV1-201ENST00000476502 284 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 AC106872.3-201ENST00000495104 446 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 AC012170.1-201ENST00000495139 359 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 RN7SKP256-201ENST00000517201 314 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 RNU6-988P-201ENST00000519081 107 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 AL390334.1-201ENST00000556395 450 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 FRG2DP-202ENST00000566967 323 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 AC141257.3-201ENST00000572906 215 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 AC068790.5-201ENST00000602741 355 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 AP000654.2-201ENST00000605633 586 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 AC006971.1-201ENST00000407916 4486 ntBASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.92□□□□□ -1.46
COL17A1Q9UMD9 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 Y_RNA.157-201ENST00000363638 102 ntBASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 Y_RNA.176-201ENST00000363815 109 ntBASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 RNA5SP97-201ENST00000365006 84 ntBASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 AC127537.2-201ENST00000439258 465 ntBASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 AL359672.1-201ENST00000442302 409 ntBASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 AL590365.1-201ENST00000450788 243 ntBASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 PCMTD1P1-201ENST00000455560 355 ntBASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 AC099563.1-201ENST00000456086 418 ntBASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 MTND4P17-201ENST00000470444 350 ntBASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 RN7SKP283-201ENST00000517197 270 ntBASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 NRBF2P1-201ENST00000587407 859 ntBASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL17A1Q9UMD9 Y_RNA.97-201ENST00000363094 102 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 RNU6-317P-201ENST00000384031 107 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 RNU6-533P-201ENST00000384144 107 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 AC092634.6-201ENST00000418558 192 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 AC073069.1-201ENST00000428657 441 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 HMGB1P18-201ENST00000438801 619 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 RNU6-420P-201ENST00000458780 107 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 AC097493.1-201ENST00000463958 372 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 RPL32P34-201ENST00000486380 400 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 KCTD9P5-201ENST00000504141 1170 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 SMURF2P1-201ENST00000514992 481 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 AC008694.2-201ENST00000517591 306 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 AC107953.1-201ENST00000522216 297 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 MIR5186-201ENST00000577504 120 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 MIR4325-201ENST00000583049 90 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 AC012507.3-201ENST00000603556 477 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 AL359999.1-201ENST00000604513 294 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.9□□□□□ -1.46
COL17A1Q9UMD9 AL355365.1-201ENST00000616480 294 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms