Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 RNU4-73P-201ENST00000363164 141 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 RNU6-173P-201ENST00000364215 104 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 RNU6-946P-201ENST00000383878 107 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 RNU6-38P-201ENST00000384085 107 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 Y_RNA.529-201ENST00000384586 119 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 Y_RNA.576-201ENST00000384781 102 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 MIR514A2-201ENST00000385131 88 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 MIR514A3-201ENST00000385132 88 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 SOD2P1-201ENST00000396543 562 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 SDHCP2-201ENST00000398565 501 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 NDUFS5P1-201ENST00000405668 289 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 RNA5SP39-201ENST00000411245 120 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 RPS23P10-201ENST00000416185 486 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 AC004552.1-201ENST00000419089 348 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 AL118520.1-201ENST00000450770 291 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 AL162388.1-201ENST00000450912 352 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 FGF7P3-201ENST00000454645 303 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 RNU6-333P-201ENST00000459117 107 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 RPS26P3-201ENST00000470205 348 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 AC090543.2-201ENST00000483963 348 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 AC004057.1-201ENST00000485827 348 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 GMPSP1-201ENST00000514075 579 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 PSMA3P-201ENST00000555485 635 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 AC010133.1-201ENST00000615809 842 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 uc_338.34-201ENST00000617467 174 ntBASIC5.17□□□□□ -1.58
DDX41Q9UJV9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
DDX41Q9UJV9 MTND4P35-201ENST00000604257 1375 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 RNA5SP513-201ENST00000364648 118 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 RNU6-76P-201ENST00000384060 104 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 MIR921-201ENST00000401133 56 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 RNA5SP104-201ENST00000410989 118 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 AC007390.1-201ENST00000415722 356 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 IFNA20P-201ENST00000436840 528 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 RPL23AP93-201ENST00000440847 484 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 GAPDHP27-201ENST00000447427 1020 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 FABP5P13-201ENST00000452144 328 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 ISCUP1-201ENST00000454451 448 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 RPL23AP24-201ENST00000458203 385 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 TRBV1-201ENST00000476502 284 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 AC025445.1-201ENST00000502728 300 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 FGF7P4-201ENST00000509595 295 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 RN7SKP256-201ENST00000517201 314 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 AP004371.1-201ENST00000525240 214 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 AL356055.1-201ENST00000602528 446 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 AC174048.1-201ENST00000603389 144 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 AL353621.2-201ENST00000605340 133 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 MAPK10-320ENST00000641462 6696 ntBASIC5.16□□□□□ -1.58
DDX41Q9UJV9 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.16□□□□□ -1.58
DDX41Q9UJV9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
DDX41Q9UJV9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
DDX41Q9UJV9 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
DDX41Q9UJV9 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
DDX41Q9UJV9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
DDX41Q9UJV9 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
DDX41Q9UJV9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
DDX41Q9UJV9 MAPK10-253ENST00000641010 4072 ntBASIC5.15□□□□□ -1.58
DDX41Q9UJV9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
DDX41Q9UJV9 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
DDX41Q9UJV9 RNU4-76P-201ENST00000364509 141 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 RNU4-20P-201ENST00000365601 151 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 RNU6-1279P-201ENST00000383917 103 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 AL356432.1-201ENST00000405809 419 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 Y_RNA.615-201ENST00000410769 117 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 MTND3P8-201ENST00000412909 339 ntBASIC5.15□□□□□ -1.59
DDX41Q9UJV9 PDCL2P1-201ENST00000419302 352 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms