Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC093536.2-201ENST00000565257 1406 ntBASIC2.01□□□□□ -2.09
SCN11AQ9UI33 NR1H5P-201ENST00000452683 1377 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 U8.1-201ENST00000362843 134 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 SNORD114-26-201ENST00000363543 72 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 POLHP1-201ENST00000411806 470 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2□□□□□ -2.09
SCN11AQ9UI33 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2□□□□□ -2.09
SCN11AQ9UI33 AC009901.1-201ENST00000506703 541 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 RNU4-60P-201ENST00000517239 135 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 AC006023.2-201ENST00000609916 167 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2□□□□□ -2.09
SCN11AQ9UI33 AC103710.2-202ENST00000641454 2853 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 SNRPEP2-201ENST00000397592 279 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2□□□□□ -2.09
SCN11AQ9UI33 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2□□□□□ -2.09
SCN11AQ9UI33 UBBP3-201ENST00000445497 241 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 RNU6-1218P-201ENST00000458990 108 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 HMGN1P8-201ENST00000463578 288 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2□□□□□ -2.09
SCN11AQ9UI33 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2□□□□□ -2.09
SCN11AQ9UI33 AP003122.6-201ENST00000623831 495 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2□□□□□ -2.09
SCN11AQ9UI33 OR4G1P-203ENST00000641984 1631 ntBASIC2□□□□□ -2.09
SCN11AQ9UI33 Z82195.2-201ENST00000612348 18351 ntBASIC1.99□□□□□ -2.09
SCN11AQ9UI33 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.99□□□□□ -2.09
SCN11AQ9UI33 AL357078.2-201ENST00000416486 427 ntBASIC1.99□□□□□ -2.09
SCN11AQ9UI33 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN11AQ9UI33 PSMA2P3-201ENST00000429685 675 ntBASIC1.99□□□□□ -2.09
SCN11AQ9UI33 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN11AQ9UI33 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.99□□□□□ -2.09
SCN11AQ9UI33 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN11AQ9UI33 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.99□□□□□ -2.09
SCN11AQ9UI33 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.99□□□□□ -2.09
SCN11AQ9UI33 NUP58P1-201ENST00000502546 1738 ntBASIC1.99□□□□□ -2.09
SCN11AQ9UI33 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SCN11AQ9UI33 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 SNORD114-22-201ENST00000365423 72 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 Y_RNA.354-201ENST00000365448 111 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 AC090096.1-201ENST00000489168 390 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 MIR449C-201ENST00000516047 92 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 AC125611.2-201ENST00000551907 647 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 AC008015.1-201ENST00000555505 465 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 SNORD53B-201ENST00000577887 78 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 AC022709.1-201ENST00000615967 87 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 MIR6515-201ENST00000619843 57 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 SNORA7.1-201ENST00000363750 139 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 MIR153-1-201ENST00000384914 90 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 MIR607-201ENST00000385241 96 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 RPS7P2-201ENST00000435134 607 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 AC007395.1-201ENST00000451333 677 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 RPS15AP36-201ENST00000492022 382 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 MTCO2P32-201ENST00000514865 403 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.98□□□□□ -2.09
SCN11AQ9UI33 MTND2P13-201ENST00000577438 1039 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 AP000676.4-201ENST00000624659 623 ntBASIC1.98□□□□□ -2.09
SCN11AQ9UI33 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.97□□□□□ -2.09
SCN11AQ9UI33 RNU1-42P-201ENST00000364033 160 ntBASIC1.97□□□□□ -2.09
SCN11AQ9UI33 AC073264.1-201ENST00000411508 416 ntBASIC1.97□□□□□ -2.09
SCN11AQ9UI33 POLR2J4-204ENST00000418424 324 ntBASIC1.97□□□□□ -2.09
SCN11AQ9UI33 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.97□□□□□ -2.09
SCN11AQ9UI33 PAICSP7-201ENST00000419829 962 ntBASIC1.97□□□□□ -2.09
SCN11AQ9UI33 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.97□□□□□ -2.09
SCN11AQ9UI33 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.97□□□□□ -2.09
SCN11AQ9UI33 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.97□□□□□ -2.09
SCN11AQ9UI33 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.97□□□□□ -2.09
SCN11AQ9UI33 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SCN11AQ9UI33 AL121839.1-201ENST00000556233 1185 ntBASIC1.97□□□□□ -2.09
SCN11AQ9UI33 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.97□□□□□ -2.09
SCN11AQ9UI33 MIR5194-201ENST00000582634 120 ntBASIC1.97□□□□□ -2.09
SCN11AQ9UI33 SNORD84-203ENST00000584275 78 ntBASIC1.97□□□□□ -2.09
SCN11AQ9UI33 LLPHP1-201ENST00000603571 367 ntBASIC1.97□□□□□ -2.09
SCN11AQ9UI33 AC140725.3-201ENST00000616193 880 ntBASIC1.97□□□□□ -2.09
SCN11AQ9UI33 MIR6734-201ENST00000621166 68 ntBASIC1.97□□□□□ -2.09
SCN11AQ9UI33 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
SCN11AQ9UI33 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SCN11AQ9UI33 PABPC1P7-201ENST00000413177 1513 ntBASIC1.96□□□□□ -2.1
SCN11AQ9UI33 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.96□□□□□ -2.1
SCN11AQ9UI33 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SCN11AQ9UI33 MIR517C-201ENST00000385103 95 ntBASIC1.96□□□□□ -2.1
SCN11AQ9UI33 AC013404.1-201ENST00000413068 249 ntBASIC1.96□□□□□ -2.1
SCN11AQ9UI33 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.96□□□□□ -2.1
SCN11AQ9UI33 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.96□□□□□ -2.1
SCN11AQ9UI33 ATP5EP1-201ENST00000510257 156 ntBASIC1.96□□□□□ -2.1
SCN11AQ9UI33 RPPH1-2P-201ENST00000516688 293 ntBASIC1.96□□□□□ -2.1
SCN11AQ9UI33 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms