Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 SNORA31.8-201ENST00000516327 108 ntBASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AC022616.6-201ENST00000520479 119 ntBASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 DEFB108D-201ENST00000527787 222 ntBASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AC123904.2-201ENST00000548059 300 ntBASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AC006362.1-201ENST00000567392 174 ntBASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AL356432.3-201ENST00000568952 465 ntBASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AC004908.2-201ENST00000609090 574 ntBASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AC093838.1-201ENST00000613014 469 ntBASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AC011939.3-201ENST00000613686 466 ntBASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 AC010149.2-201ENST00000637608 315 ntBASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NPAP1Q9NZP6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AL353746.1-201ENST00000566293 6881 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 ZNF285B-201ENST00000561698 1767 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 MIR30E-201ENST00000362104 92 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 RNU6-223P-201ENST00000362830 107 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 RNU5E-8P-201ENST00000363502 116 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 RNU6-432P-201ENST00000384196 109 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 RNU4-65P-201ENST00000410473 140 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 RNU2-37P-201ENST00000410695 177 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC245291.1-201ENST00000419501 328 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 MTCO2P34-201ENST00000421994 607 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 VN1R108P-201ENST00000431580 830 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC024082.2-201ENST00000434771 238 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AL353706.1-201ENST00000436728 494 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 FTH1P1-201ENST00000437933 532 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 PGBD4P3-201ENST00000440731 581 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 RPL17P49-201ENST00000443728 411 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 USP9YP29-201ENST00000445112 563 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 snoU109.1-201ENST00000459339 135 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 RPL7P15-201ENST00000461190 712 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AL133162.1-201ENST00000463228 453 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 LARP1BP2-201ENST00000486594 519 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC135721.1-201ENST00000497954 479 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 UBE2CP3-201ENST00000502715 450 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC114967.1-201ENST00000504890 259 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 VN1R104P-201ENST00000505115 1009 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 CBX3P3-201ENST00000508108 532 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AP003467.2-201ENST00000520175 319 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC125611.2-201ENST00000551907 647 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AL157394.1-201ENST00000562983 1224 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 MIR4444-1-201ENST00000581696 74 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 MIR4444-2-201ENST00000584390 74 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC009977.1-201ENST00000586015 570 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC121334.2-201ENST00000605387 271 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 RNU6-87P-201ENST00000607561 108 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC007038.2-201ENST00000608095 740 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 XIST_intron.1-201ENST00000619444 68 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC079684.1-201ENST00000621405 437 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AL159972.1-201ENST00000625150 448 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC019226.1-201ENST00000625666 515 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 MIR4275-201ENST00000636486 87 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AC099654.13-201ENST00000639774 207 ntBASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.31□□□□□ -1.88
NPAP1Q9NZP6 TEX21P-201ENST00000447107 1476 ntBASIC3.3□□□□□ -1.88
NPAP1Q9NZP6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
NPAP1Q9NZP6 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NPAP1Q9NZP6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NPAP1Q9NZP6 RNA5SP383-201ENST00000362934 120 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms