Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AC092628.2-201ENST00000622492 339 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AL160394.1-201ENST00000624765 724 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AC007496.3-201ENST00000624987 3443 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 MTND5P3-201ENST00000438536 1800 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 AC032011.1-201ENST00000611703 1549 ntBASIC3.6□□□□□ -1.83
SMARCAL1Q9NZC9 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AL161781.1-201ENST00000354277 403 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 RNY4P34-201ENST00000364779 95 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 RN7SKP226-201ENST00000364912 300 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 Y_RNA.582-201ENST00000391023 95 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 RNU2-15P-201ENST00000410692 191 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6-195P-201ENST00000411352 109 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AC007390.1-201ENST00000415722 356 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 MTND6P13-201ENST00000443510 523 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 NPM1P49-201ENST00000448027 714 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 RPL7P52-201ENST00000449200 742 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 GAPDHP17-201ENST00000449858 1001 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AL672167.3-201ENST00000465951 960 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 RNU1-143P-201ENST00000516296 146 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 RNU6-714P-201ENST00000516963 103 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 MTND4LP26-201ENST00000518144 282 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AC107934.2-201ENST00000518653 310 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 RANP9-201ENST00000519957 271 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 HMGN1P30-201ENST00000589286 268 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AC093227.2-201ENST00000589357 285 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AC112230.1-201ENST00000604342 547 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AL161729.4-201ENST00000604650 476 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 U1.23-201ENST00000610293 146 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AL121772.2-201ENST00000614331 297 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 RNU1-68P-201ENST00000615382 146 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 U1.39-201ENST00000621562 146 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AC110994.2-201ENST00000635481 492 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 OR5AK4P-201ENST00000635912 903 ntBASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMARCAL1Q9NZC9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMARCAL1Q9NZC9 AL157700.1-201ENST00000561973 1432 ntBASIC3.59□□□□□ -1.84
SMARCAL1Q9NZC9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
SMARCAL1Q9NZC9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SMARCAL1Q9NZC9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 SRP72P2-201ENST00000344851 1979 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AC090337.1-201ENST00000579651 2074 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 Y_RNA.46-201ENST00000362695 102 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 RNU6-1207P-201ENST00000384343 107 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 Y_RNA.548-201ENST00000384656 105 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 MIR554-201ENST00000384874 96 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 RPL21P17-201ENST00000397467 475 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 MIR548F1-201ENST00000408667 84 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AC126124.2-201ENST00000413542 321 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 RAD23BP2-201ENST00000416003 1207 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 BX295541.1-201ENST00000417774 250 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 PSMA2P3-201ENST00000429685 675 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AC007389.2-201ENST00000434630 306 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 HMGB3P11-201ENST00000440127 604 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 RPL29P29-201ENST00000448725 423 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 MTND1P3-201ENST00000484956 952 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AC034222.1-201ENST00000494052 532 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 OR5H5P-201ENST00000503164 928 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 TXNP6-201ENST00000510190 310 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 SNORA64.4-201ENST00000516632 81 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AC023632.4-201ENST00000517783 191 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 OR5G4P-201ENST00000525251 760 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AP003181.2-201ENST00000528941 181 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AC004024.1-201ENST00000549244 247 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 EEF1B2P4-201ENST00000551398 348 ntBASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.58□□□□□ -1.84
SMARCAL1Q9NZC9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms