Protein–RNA interactions for Protein: Q9NYV4

CDK12, Cyclin-dependent kinase 12, humanhuman

Predicted RBP Predictions only

Length 1,490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12Q9NYV4 AL391646.1-201ENST00000603860 190 ntBASIC2.34□□□□□ -2.03
CDK12Q9NYV4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.34□□□□□ -2.03
CDK12Q9NYV4 RMST_6.1-201ENST00000611980 203 ntBASIC2.34□□□□□ -2.03
CDK12Q9NYV4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.34□□□□□ -2.03
CDK12Q9NYV4 DUXAP9-208ENST00000622815 614 ntBASIC2.34□□□□□ -2.03
CDK12Q9NYV4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CDK12Q9NYV4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CDK12Q9NYV4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CDK12Q9NYV4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 HSPE1P11-201ENST00000339579 310 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 MIR625-201ENST00000385047 85 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 RNA5SP492-201ENST00000411330 114 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 AP001804.3-201ENST00000525146 880 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 AC008015.1-201ENST00000555505 465 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 AL049838.1-201ENST00000563647 981 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 MIR3935-201ENST00000583472 104 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 MIR4448-201ENST00000584360 86 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 AC034236.3-201ENST00000605999 461 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 AC090425.2-201ENST00000608818 501 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 MTCO1P4-201ENST00000520516 1409 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 AC110792.3-201ENST00000595906 1614 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 RNU1-93P-201ENST00000364704 169 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 PRELID3BP11-201ENST00000414230 479 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 PAICSP7-201ENST00000419829 962 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 RPL21P131-201ENST00000497298 483 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.33□□□□□ -2.04
CDK12Q9NYV4 AL137100.2-201ENST00000555786 315 ntBASIC2.33□□□□□ -2.04
CDK12Q9NYV4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CDK12Q9NYV4 AC002546.1-201ENST00000588041 2504 ntBASIC2.32□□□□□ -2.04
CDK12Q9NYV4 OR4G11P-202ENST00000642116 1414 ntBASIC2.32□□□□□ -2.04
CDK12Q9NYV4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CDK12Q9NYV4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDK12Q9NYV4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDK12Q9NYV4 MIR96-201ENST00000362288 78 ntBASIC2.32□□□□□ -2.04
CDK12Q9NYV4 RNA5SP27-201ENST00000363839 119 ntBASIC2.32□□□□□ -2.04
CDK12Q9NYV4 AC114973.1-201ENST00000429057 632 ntBASIC2.32□□□□□ -2.04
CDK12Q9NYV4 AC023050.1-201ENST00000498198 304 ntBASIC2.32□□□□□ -2.04
CDK12Q9NYV4 AC021146.7-201ENST00000509604 775 ntBASIC2.32□□□□□ -2.04
CDK12Q9NYV4 RPL21P5-201ENST00000554662 472 ntBASIC2.32□□□□□ -2.04
CDK12Q9NYV4 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.32□□□□□ -2.04
CDK12Q9NYV4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.32□□□□□ -2.04
CDK12Q9NYV4 AC068700.1-201ENST00000565862 3754 ntBASIC2.32□□□□□ -2.04
CDK12Q9NYV4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.31□□□□□ -2.04
CDK12Q9NYV4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.31□□□□□ -2.04
CDK12Q9NYV4 UBE2L2-201ENST00000254302 429 ntBASIC2.31□□□□□ -2.04
CDK12Q9NYV4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.31□□□□□ -2.04
CDK12Q9NYV4 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.31□□□□□ -2.04
CDK12Q9NYV4 XKRYP6-201ENST00000440468 1116 ntBASIC2.31□□□□□ -2.04
CDK12Q9NYV4 XKRYP3-201ENST00000442113 1116 ntBASIC2.31□□□□□ -2.04
CDK12Q9NYV4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.31□□□□□ -2.04
CDK12Q9NYV4 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.31□□□□□ -2.04
CDK12Q9NYV4 AC108734.3-201ENST00000481241 1165 ntBASIC2.31□□□□□ -2.04
CDK12Q9NYV4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.31□□□□□ -2.04
CDK12Q9NYV4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDK12Q9NYV4 MTCO3P24-201ENST00000572729 782 ntBASIC2.31□□□□□ -2.04
CDK12Q9NYV4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.31□□□□□ -2.04
CDK12Q9NYV4 AC091057.2-201ENST00000602594 792 ntBASIC2.31□□□□□ -2.04
CDK12Q9NYV4 KATNBL1P1-201ENST00000605192 748 ntBASIC2.31□□□□□ -2.04
CDK12Q9NYV4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.31□□□□□ -2.04
CDK12Q9NYV4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.3□□□□□ -2.04
CDK12Q9NYV4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CDK12Q9NYV4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.3□□□□□ -2.04
CDK12Q9NYV4 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.3□□□□□ -2.04
CDK12Q9NYV4 AC109471.1-201ENST00000511631 612 ntBASIC2.3□□□□□ -2.04
CDK12Q9NYV4 AC025423.2-201ENST00000537570 439 ntBASIC2.3□□□□□ -2.04
CDK12Q9NYV4 AC007375.1-201ENST00000554513 578 ntBASIC2.3□□□□□ -2.04
CDK12Q9NYV4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CDK12Q9NYV4 AC131280.1-202ENST00000624067 4211 ntBASIC2.3□□□□□ -2.04
CDK12Q9NYV4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDK12Q9NYV4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CDK12Q9NYV4 RNA5SP189-201ENST00000364920 115 ntBASIC2.29□□□□□ -2.04
CDK12Q9NYV4 RNU1-101P-201ENST00000391171 127 ntBASIC2.29□□□□□ -2.04
CDK12Q9NYV4 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.29□□□□□ -2.04
CDK12Q9NYV4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.29□□□□□ -2.04
CDK12Q9NYV4 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDK12Q9NYV4 CALM1P2-201ENST00000452941 448 ntBASIC2.29□□□□□ -2.04
CDK12Q9NYV4 SSXP1-201ENST00000453640 473 ntBASIC2.29□□□□□ -2.04
CDK12Q9NYV4 RPL21P103-201ENST00000479921 488 ntBASIC2.29□□□□□ -2.04
CDK12Q9NYV4 AC034222.1-201ENST00000494052 532 ntBASIC2.29□□□□□ -2.04
CDK12Q9NYV4 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.29□□□□□ -2.04
CDK12Q9NYV4 MIR4419B-201ENST00000577260 68 ntBASIC2.29□□□□□ -2.04
CDK12Q9NYV4 SEPT7P9-203ENST00000604116 343 ntBASIC2.29□□□□□ -2.04
CDK12Q9NYV4 RNA5SP108-201ENST00000605921 117 ntBASIC2.29□□□□□ -2.04
CDK12Q9NYV4 AC105429.2-201ENST00000610567 517 ntBASIC2.29□□□□□ -2.04
CDK12Q9NYV4 STMN1P1-201ENST00000617809 440 ntBASIC2.29□□□□□ -2.04
CDK12Q9NYV4 AL353748.2-201ENST00000622148 471 ntBASIC2.29□□□□□ -2.04
CDK12Q9NYV4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDK12Q9NYV4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDK12Q9NYV4 MIR144-201ENST00000384886 86 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms